Agrobacterium vaccinii: HRR99_13730
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Entry
HRR99_13730 CDS
T08171
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
avq
Agrobacterium vaccinii
Pathway
avq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
avq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HRR99_13730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
avq03019
]
HRR99_13730
Messenger RNA biogenesis [BR:
avq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HRR99_13730
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
Motif
Other DBs
NCBI-ProteinID:
UHS62508
LinkDB
All DBs
Position
circular:2815893..2816399
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AA seq
168 aa
AA seq
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MIKADDLPYRPCAGIMVLNAQGLVWAGRRISQGNSEFDGSPQLWQMPQGGIDEGEKPLLA
AIRELYEETGMKTVSLLAEARDWIHYDLPPQLIGVGLRGKYRGQAQRWFAFRFEGDESEI
QINPPPTGHEPEFDAWAWKPMESLPDLIVPFKRGVYEQVVAEFRHLAD
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaagcagacgatcttccctaccgtccctgtgccggtatcatggtgctcaacgcg
caaggtttggtctgggccggacggcgtatttcccaaggcaattcagagttcgatggttct
ccgcaactgtggcagatgccacagggtggcattgatgaaggcgagaagcctctgctcgct
gccatcagagaactctatgaggaaacgggtatgaagaccgtctcgctcctcgcagaagca
cgtgactggattcattacgacctgccaccgcagctgatcggtgttggccttcgaggaaag
tatcgcggacaggcacagcgctggtttgcgttccgcttcgagggcgatgaaagcgaaatt
cagataaacccaccaccgacaggccatgagcctgaattcgatgcctgggcgtggaaacca
atggaaagcctgcccgacctgatcgtccccttcaaacgcggggtctatgagcaggtggtg
gccgagttcagacatctcgcagactga
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