Agrobacterium vaccinii: HRR99_14140
Help
Entry
HRR99_14140 CDS
T08171
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
avq
Agrobacterium vaccinii
Pathway
avq00300
Lysine biosynthesis
avq00470
D-Amino acid metabolism
avq01100
Metabolic pathways
avq01110
Biosynthesis of secondary metabolites
avq01120
Microbial metabolism in diverse environments
avq01230
Biosynthesis of amino acids
Module
avq_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
avq00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HRR99_14140
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HRR99_14140
Enzymes [BR:
avq01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
HRR99_14140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
UHS62583
LinkDB
All DBs
Position
circular:complement(2918620..2919522)
Genome browser
AA seq
300 aa
AA seq
DB search
MTNTVEFAKMNGLGNKILVVDMRGRKDMVTPQAAIALNADAQTAFDQIMAIHDPRAHGTD
AYIDILNCDGTKAQACGNGTRCVVQALASETGKKTFTFQTVAGILNASEHEDGMISVDMG
MPRFAWNDIPLSEEFHDTSRIELQIGPIDNPVLHSPAVMSMGNPHAVFWVNSDPMEFDLE
RFGPLLENHPMFPEKANITLAQVISDSRLRTRTFERGAGLTLACGSAACAAAVSAARTGR
TGRSVEIDVASSPVRIPLTIEWRKDNHVVMTGPAEWEWAGTVDPVTGTWTRDTAPEQAAV
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgacaaacacggtcgaattcgcgaagatgaacgggcttggcaacaagatcctggttgtc
gatatgcgcggccgcaaggacatggtgaccccgcaggcggcgattgcgctgaatgcggat
gcgcagaccgctttcgaccagatcatggccatccacgatccgcgcgcccacggcaccgat
gcctatatcgacatcctcaattgcgatggcaccaaggcgcaggcctgcggcaatggtaca
cgctgcgtggtgcaggcgctggcatccgagaccggcaagaagaccttcaccttccagacc
gtggcgggcattttgaacgccagcgaacacgaagacggcatgatatcggtcgatatgggc
atgccgcgcttcgcctggaacgacattccgctgtcggaagaattccacgataccagccgc
atcgagcttcagatcgggccgatcgacaaccccgtgctgcattcgcccgccgtcatgtcg
atgggcaatccgcacgcggtgttctgggtcaatagcgacccgatggagttcgatctggag
cgcttcggtccgctgctggaaaaccacccgatgtttcccgaaaaggcaaatatcacgctg
gcgcaggtcatctccgatagcaggttgcgcacccgcaccttcgagcgtggtgcaggcctg
acgctggcatgcggttccgccgcttgtgccgctgccgtgtccgctgcccgcaccggcaga
acgggacgcagcgtcgagatcgacgtcgcttccagcccggttcgcattccgctgaccatc
gaatggcgcaaagacaatcacgtcgtcatgaccggccctgccgaatgggaatgggctggc
accgtcgatcccgtcaccggcacatggacccgcgatacggcgccggaacaggcggccgta
tga
DBGET
integrated database retrieval system