Agrobacterium vaccinii: HRR99_14895
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Entry
HRR99_14895 CDS
T08171
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
avq
Agrobacterium vaccinii
Brite
KEGG Orthology (KO) [BR:
avq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
avq03016
]
HRR99_14895 (truB)
Enzymes [BR:
avq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HRR99_14895 (truB)
Transfer RNA biogenesis [BR:
avq03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HRR99_14895 (truB)
Prokaryotic type
HRR99_14895 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
UHS62719
LinkDB
All DBs
Position
circular:complement(3084130..3085077)
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AA seq
315 aa
AA seq
DB search
MSKPRKQQHRKPKGRPISGWLILDKPFDFGSTEAVSKIKWLFNAQKAGHAGTLDPLASGM
LPIALGDATKTVPYVMDGRKIYEFTVTWGEERTTDDMEGDVLNTSADRPNEQAIRDLLPN
YTGTILQIPPQFSAIKIAGERAYDLARSGEEVEIPAREVEIHRITLLACPDADTAHFEVE
CGKGTYVRALARDMGRDLGCYGFISELRRSMVAPFAEDAMVPLAKLVEFEAIEDRDERLA
ALDAYLIDTSEALSSLPHLIINDDQAHRLKMGNPILLRGRDAPTQEMEAYATARGKLIAI
GEIAEGEFRPKRVFG
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaccacgcaaacaacaacaccgtaagcccaagggccgaccgatttccggctgg
cttatcctcgacaagccgttcgatttcggctctaccgaggccgtttcgaaaatcaaatgg
ctcttcaacgcacagaaggccggtcatgctggcacgcttgatcccttggcctccggtatg
ttgccgattgcgctgggagatgccacgaagaccgtgccttatgtgatggatggccgtaag
atatacgagttcaccgtaacctggggcgaagagcggaccaccgacgacatggaaggtgat
gtgctcaacacatcagccgaccgtccgaatgagcaggcgatccgcgatctgctgcccaac
tataccggcacgatcctccagataccgccgcagttttccgcgatcaagattgccggagag
cgggcctacgatctggcgcgcagtggcgaggaagtcgaaattccggcccgtgaggtcgag
atacaccggatcaccctgctggcctgccccgatgccgataccgcccatttcgaagtggag
tgcggcaagggaacctatgtgcgtgcacttgcccgtgacatgggccgcgatctgggttgc
tatggctttatctctgagctgcgccgctccatggtcgcaccctttgccgaagacgcgatg
gtgccgcttgcaaagcttgtcgagttcgaagccatcgaagaccgtgacgagcggttggcg
gcgctggacgcctatttgatcgacacgtcggaagcgctttcgtcgctgccgcatctcatc
atcaatgatgaccaggcccatcggctcaaaatgggtaatcccattcttctgcgcgggcgc
gatgcgccgacacaggagatggaagcctatgcgaccgctcgcggcaagcttattgccatc
ggcgaaattgccgaaggcgagttccgcccgaagcgcgttttcggctga
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