Agrobacterium vaccinii: HRR99_15075
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Entry
HRR99_15075 CDS
T08171
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
avq
Agrobacterium vaccinii
Pathway
avq03030
DNA replication
avq03430
Mismatch repair
avq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
avq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HRR99_15075
03430 Mismatch repair
HRR99_15075
03440 Homologous recombination
HRR99_15075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
avq03032
]
HRR99_15075
03400 DNA repair and recombination proteins [BR:
avq03400
]
HRR99_15075
Enzymes [BR:
avq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HRR99_15075
DNA replication proteins [BR:
avq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HRR99_15075
DNA repair and recombination proteins [BR:
avq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HRR99_15075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DUF3646
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_22
AAA_16
AAA_30
AAA_5
AAA_14
AAA_19
RuvB_N
AAA_18
AAA_assoc_2
AAA_24
TsaE
SRP54
SKI
DUF815
Rad17
ABC_tran
VapE-like_dom
AAA_2
RNA_helicase
nSTAND3
CbiA
AAA_28
Motif
Other DBs
NCBI-ProteinID:
UHS62753
LinkDB
All DBs
Position
circular:3126276..3128141
Genome browser
AA seq
621 aa
AA seq
DB search
MSETGTNMPQTKEQGTGYRVLARKYRPKDFSDLMVGQEPMVRTLTNAFETGRIAQAYMLT
GVRGVGKTTTARILARALNYKTDEIDKPTIDLRIPGEHCQAIMEGRHVDVIEMDAASHTG
IDDIREIIEQVRYRPVSARYKVYIIDEVHMLSTQAFNGLLKTLEEPPEHVKFIFATTEIR
KVPITVLSRCQRFDLRRISAADLVGLFTAIAAKEGFEAEPQALAMIARAAEGSARDGLSL
LDQAIAHGGGHVEAEAVRGMLGLADRARIVDLFQHVVKGDVAAALSEFTAQYEAGANPVV
VLNDLADFTHLVTRMKYVPDAAEDPSLSEVERVSGAEFADSIAVSTLSRIWQMLLKGIPE
TENASRPAGAAEMVLIRLSHAANLPAPEDAARRLLELANGDGGASNGTPSGGGNGGGARA
YSSTQAVASAQVSPQRQTSPQPTAMLRTVPDSRPQEMQVATPKPEERPEPKVPVNSLSDI
VDLCTKHREPILKARLRNFVHLVRLEPGRFDLRLGEGAPGSLPGEIGVKLKEWTGIHWIV
SISKEQGEPTLVEAEGNAREARFVDARQDPDVAAILAQFPGAKITDVRIRTPVPDDVEEI
APPSVVESSEGDILPGDDIEF
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaccggaaccaatatgccccagaccaaagagcagggtacaggttaccgggtt
ctggcacgaaagtaccgcccgaaagacttttctgatttgatggttggccaggagccgatg
gttcgcacgctgaccaatgcgttcgagaccgggcgcattgcgcaagcctatatgctgacc
ggtgttcgcggtgtgggcaagaccacgacagcccgcattctggcacgtgcgctgaattac
aaaaccgacgaaatcgacaagccgaccatcgacctacggatccccggcgaacattgccag
gccatcatggaaggccgccatgtcgatgtgatcgagatggacgctgcctctcataccggc
atcgatgacatcagagagattatcgagcaggtgcgctatcgtcctgtttcggcgcgctac
aaagtctatatcatcgacgaagtgcacatgctctcgacgcaggccttcaacggccttctg
aagacgctggaagagccgccggaacatgtgaaattcatcttcgcaacgaccgaaatccgc
aaagttccgattaccgttctgtcgcgttgccagcggttcgatctgcgccgcatcagcgct
gccgatctggttgggctgtttacggccattgcagcaaaagaaggtttcgaggcagagccg
caggcgctggccatgatcgcccgtgcagctgaaggttccgctcgtgatggtctgtctctg
ctcgatcaggccattgcccatggcggcggacatgtggaggcggaagccgttcgcggcatg
ctgggccttgccgaccgcgcccgtatcgttgatctgtttcaacatgtggtgaagggtgat
gtcgccgcggccctgagtgaattcacggctcaatacgaggcgggtgcgaaccctgtcgtc
gttctcaacgatctggctgattttacgcatctcgttacgcgcatgaaatatgtgccggac
gcggcggaagacccgtcgctgtcagaggtcgagcgtgtcagtggtgcggagtttgccgac
agtatcgcggtttccaccctgtcgcgcatctggcagatgctgctgaagggtattcctgaa
acggaaaatgcctcccgccccgcaggagctgccgagatggtgctgatccgtctctcgcat
gcggccaatctgcccgcgcccgaagatgctgcccgtcggctgctggagcttgccaatggg
gatggcggcgcgtccaacggcacgccctccggtggcggtaatggcggcggtgcacgcgcc
tattcgtctacgcaggccgttgcctccgctcaagtttcgccgcagcgccagacatcgccg
cagccgaccgccatgctgcgcaccgtgccggacagccgcccgcaagagatgcaggtcgct
acccccaagccagaagaacggccagagcccaaggttccggtcaactccttgagtgacatc
gtcgatctctgcaccaaacaccgtgaaccaatcctcaaagcgaggctgcgcaattttgtc
catcttgtgcggctggagcccgggcgcttcgacctgagactcggcgaaggcgctcccggc
tcgcttcccggtgagatcggcgtcaagctcaaggagtggaccggcatccactggatcgtc
agcatcagcaaggaacagggtgagccgacgcttgtcgaagcggaaggcaatgcgcgcgaa
gcccgttttgtggatgcgcggcaagatcccgatgtcgccgctattctagcgcagtttccc
ggtgccaagattacagacgttcgcatcagaacaccggtgcccgacgacgtcgaagagatc
gcaccaccatccgttgtcgaatcgagtgaaggcgacattcttcccggcgacgatatcgaa
ttctag
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