Agrobacterium vaccinii: HRR99_15370
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Entry
HRR99_15370 CDS
T08171
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
avq
Agrobacterium vaccinii
Pathway
avq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
avq00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HRR99_15370
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avq02000
]
HRR99_15370
Transporters [BR:
avq02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
HRR99_15370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
UHS63000
LinkDB
All DBs
Position
linear:complement(50928..52460)
Genome browser
AA seq
510 aa
AA seq
DB search
MTRINRGLTAFVALALSSVAFTAAPAIAAGKMTISTPQDPGSWDPIDTFLVQWAAVATNI
FDGLTYRGPDLKLVPGLAESWEELDEGKRIRFKLRQNVKFHNGEPFNAEAVKFTFDRLLG
EQGAKGPQRSNYTAIESVEIIDENTVDMKLKAPDPVLLTKLAGYGAMIVPPKYIQEKGED
NFNTNPVGTGAFKFVSYAPKVNIKLEANPDYWGGPPKLSELDYRFISEPATAVAELQAGR
VDLVIPPTIPIGMLPVIQGDSKLEIVSVPGPTVDALRFNTRDGITADPKVRKAIIMAVDR
ATIVKSILAGQGSEIASFQGALSFGYDSELKPLPYDPEGAKKLLAEAGVKPGATVQIDIR
GNDATMNEVTQVIASYLQMVGITATIKPYETNVLLNDIIPQGKTGAMFQQKWGGWTFDYD
NTAYSMYHSGEKWNPYEKDAALDKLLESQRPLTDRAERERILKEIGKATAEKALELPLYN
SNAIYGVSKKVKGFVAPPDNRLKLTDVTVE
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgaccagaataaacagggggctgacggccttcgtggcgcttgccctgtcaagcgtggct
tttactgccgcaccggcaattgcagccggaaaaatgacgatttccaccccgcaggaccca
ggcagctgggaccccatcgatacatttctggtccagtgggctgccgttgccaccaacatc
ttcgatggcctgacctatcgtggccctgatctgaagctcgtgccgggtcttgctgaatcc
tgggaagaattggacgaaggcaagcgcattcgcttcaagcttcgccagaacgttaagttc
cacaatggcgagccattcaacgcggaagccgtcaagttcaccttcgatcgcctgcttggc
gaacagggtgcgaaggggccgcagcgttccaactacacggccatcgaaagcgtcgagatc
atcgacgagaacaccgtggacatgaagctgaaggctcccgatcccgttctgctgaccaag
cttgccggatatggtgccatgatcgtgccgccaaagtacattcaggaaaagggtgaagac
aacttcaacaccaatcctgtcggcacgggtgcattcaaattcgtgtcctacgcgccgaag
gtgaacatcaagctggaagccaacccggattactggggcggcccgccgaagttgtctgag
ctcgattaccgcttcatctccgaaccggcgacagccgttgccgagctccaggctggccgt
gtcgatctcgtcattccgcctacgatccctattggcatgctgccggtcattcagggcgat
tccaagctggaaatcgtgagcgttcccggcccaaccgtcgatgctctgcgcttcaatacg
cgtgatggcatcacggctgatccgaaggttcgcaaggcgatcatcatggcagtggatcgt
gcgaccatcgtcaagtcgatccttgcagggcagggctctgaaatcgcaagcttccagggc
gcgttgtcatttggttacgactcagaactgaaaccgcttccttacgatccagaaggcgca
aaaaagcttctggcagaggctggcgtaaagccgggtgcaactgttcagatcgatattcgt
ggtaatgacgcgacgatgaacgaggttacgcaggtcatcgccagctacctccagatggtc
ggcattaccgccaccatcaagccttatgaaaccaacgttctgctgaatgatatcattccg
cagggtaagaccggtgccatgttccagcagaagtggggcggctggaccttcgattacgac
aacaccgcctattccatgtatcactccggtgaaaagtggaatccttacgaaaaggacgct
gcgctggacaagctgctggaatcccaacgcccgctgacggaccgcgcggagcgtgagcgc
atcctgaaggaaatcggcaaagcgactgccgagaaggctcttgagctgccgctctacaac
agcaacgcgatctatggcgtcagcaagaaggtcaagggcttcgtcgccccgccggataac
cgcctgaaactgaccgacgtcaccgtcgagtaa
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