Agrobacterium vaccinii: HRR99_15605
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Entry
HRR99_15605 CDS
T08171
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
avq
Agrobacterium vaccinii
Pathway
avq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
avq00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HRR99_15605
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avq02000
]
HRR99_15605
Transporters [BR:
avq02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
HRR99_15605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
UHS63042
LinkDB
All DBs
Position
linear:106109..107665
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AA seq
518 aa
AA seq
DB search
MQLSRILMAGAALLTLAMPASATTLKWGASRDISSLDPYSYGDSFALGVLNHSYEGLMRY
DRNLKLEPALAVSYEIVSPTTWRFKLREGVKFHNGADFTADDVQASLVRATNPKSPLRGN
IPAYKGSRVIDAHTIEIDVSANYPLLLNDLTTIYIFDASWLKDNNAEAPTDVGSGTEGYA
TYNENGTGPFKVESRQPDAKTVFVKYDGWWDKPQHNIDRIELTPIASSATRVAALLSGDI
DFTDQAPVQDLPRLEAASGQVKLLEGTDLRTVMIGFSQRDQLLSGAPNPMKDLRVRQAMQ
LAIDLNLIQKRVMRGKSRNAGALVAPQIPGYDAALDVPVKADPEKAKALLKEAGAEGFEF
EFNCADTLVNEEQMCQAVASMWSRVGLKPKLDQGPRAVQTPKRSAGKVDVYTLGWATLPM
LDAYSLTSQVLHTKEGSFGIFNWGGWSDKEFDKVTEASAVELDTTKRLALEAQSLKIAKD
HALMIPLHQQPLAWATSAKIADFPLFSDNLPRLWLVKM
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgcaattatccagaattttgatggcgggcgcagcactgctgacactcgctatgcccgca
tccgcgacaactttgaaatggggcgcgtcgcgcgatatcagctcgcttgacccatactcc
tacggcgatagttttgctctcggtgtgctcaatcactcctacgaaggcttgatgcgatat
gaccgcaacttgaagctcgagcccgcacttgcggtttcgtatgaaattgtctcgcccacc
acttggcgcttcaaactccgcgagggcgtaaaattccacaatggagccgatttcacggca
gacgatgtacaggcatcgctggtgcgtgcgaccaaccccaagtcaccgctgcgtggcaac
attccggcctataagggttcgcgcgtcatcgatgcacataccatcgaaatcgatgtatcg
gccaattatccgttgctgctgaacgacctgacgacgatctatatcttcgatgcgagctgg
ttgaaggataacaatgccgaggcaccgaccgatgtcggttccggcactgagggctacgcc
acctacaatgaaaacggcaccggccccttcaaagtggaaagccgccagccggatgcaaaa
acagtcttcgtgaaatatgacggctggtgggacaagcctcagcacaatatcgaccgcatc
gagctcacgccgattgcctcaagcgccacgcgcgtcgcagcacttttgtccggcgatatc
gactttacggatcaggcaccggtgcaggacttgccgcggcttgaagcggcctccgggcag
gtcaagcttctcgaaggaaccgaccttcgcaccgtcatgatcggcttcagccagcgtgac
cagttactttcgggtgcacccaacccgatgaaggacctgcgcgttcgccaggccatgcaa
ctggccatcgacctcaatctgatccagaaacgcgtcatgcgcggcaaatcccgcaatgcc
ggtgcgctcgtggcaccacagataccgggatatgatgcagccctcgacgtaccggtcaaa
gccgatcccgagaaggcaaaggcacttctcaaggaggcaggcgctgaaggttttgagttc
gaattcaactgcgcagacacgttggtcaatgaagagcagatgtgccaggccgttgcgtcc
atgtggtcgcgtgttggtctcaagccaaagctcgaccaaggtccgcgcgccgtccagaca
ccaaagcggtctgccggaaaggttgatgtctacactctcggctgggccacactgcccatg
ctggatgcctacagcctgacatcgcaggttctccacaccaaggaaggttcattcgggatt
ttcaactggggcggctggtccgacaaggaattcgacaaggtaacggaagcatcggcggtt
gaacttgacacgaccaagcgccttgcgctggaagcacaatcgctgaagatcgccaaggat
cacgcgctgatgatcccgctccatcagcagccgctggcttgggccacgagcgccaagatt
gccgatttcccgctgttttcggataacctcccgcgtttgtggctggtgaagatgtaa
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