Agrobacterium vaccinii: HRR99_16185
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Entry
HRR99_16185 CDS
T08171
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
avq
Agrobacterium vaccinii
Pathway
avq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
avq00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HRR99_16185
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avq02000
]
HRR99_16185
Transporters [BR:
avq02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
HRR99_16185
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
SMC_N
Rad17
AAA_22
RsgA_GTPase
AAA
PRK
nSTAND1
Motif
Other DBs
NCBI-ProteinID:
UHS63148
LinkDB
All DBs
Position
linear:232098..233222
Genome browser
AA seq
374 aa
AA seq
DB search
MQTIQRHQDHQNSAAHPDGATFLKLEGLTKRYGEDYMAVDNLALDVPKGKLLGLLGPSGC
GKSTTLRMIAGLLDITAGKISIEGDDISHKPPHKRDIGLVFQNYALFPHMTVAQNVAFGL
EMRSISKTEARDRVEEALEMVRLPGYGERKPKEMSGGQQQRVALARALVIRPRLLLLDEP
LSNLDAKLRDDMRIEIREIQQRLQITTVFVTHDQVEALTMCDLVGVMHRGKLAQLGTPED
IYERPADLFVANFVGRTNVLDCEIEELDRVRIGSSVYPCKTQGLTKGKAKAAIRPHRISL
TPSRDRSLVSIATNSTHGKVVRVTYIGDVVQYDIDIGGNILTTEVHTASAGHSFQSGEKL
LCEWKPQDMQVFGS
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacgatacagcgacatcaagatcatcagaactctgcggcccatcccgacggggcg
acttttctcaagcttgaaggcctcaccaaacgctacggcgaagattacatggcagtcgat
aatctcgcgttggatgttccgaaaggtaagcttcttggtctgcttggaccttcaggatgc
ggaaaatccaccacactgcggatgatcgcaggtctgctggacatcaccgcaggcaaaatc
tccattgaaggcgatgacatctcgcacaagccgccgcacaagcgcgatatcggtctggtc
ttccagaactatgccctgttcccacatatgacggtggcgcagaacgtggcctttggtctt
gaaatgcgcagcatatccaaaaccgaagcgcgcgatcgcgtggaagaagcattggaaatg
gtgcgccttcccggctacggcgaacgcaagcccaaggaaatgtccggcggtcagcagcag
cgcgtggcgctggcccgtgcactcgtcatccgcccccggcttcttcttctcgacgaacct
ctctccaacctcgatgccaagctgcgcgacgacatgcggatcgagatcagagaaattcag
caacgccttcaaatcacgaccgttttcgtaacccacgatcaagtcgaggcactgacgatg
tgcgacctcgtcggtgtcatgcaccgcggcaagctggcccaactcgggacgcccgaagat
atctatgagcgcccagccgacttgttcgtcgcgaatttcgtaggccggacaaacgttctc
gactgtgagatcgaagaactcgaccgcgtgcgtatcggatcttctgtttatccctgcaag
acgcagggtttgactaagggaaaagcgaaagcggccatccgtccccaccgtataagcctt
acaccgagccgcgaccgcagcctcgtcagcatcgcgacgaactcaacccacggcaaggtc
gtgcgcgtcacctatatcggcgacgtcgtccaatatgacatcgacatcggcggcaacatc
ctgaccaccgaagttcatacggccagtgccggtcacagcttccagagcggcgagaaactg
ctctgcgaatggaagccgcaagacatgcaagttttcgggagctga
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