Agrobacterium vaccinii: HRR99_17080
Help
Entry
HRR99_17080 CDS
T08171
Name
(GenBank) ABC transporter permease
KO
K02054
putative spermidine/putrescine transport system permease protein
Organism
avq
Agrobacterium vaccinii
Pathway
avq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
avq00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HRR99_17080
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avq02000
]
HRR99_17080
Transporters [BR:
avq02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
HRR99_17080
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
UHS63308
LinkDB
All DBs
Position
linear:440331..441509
Genome browser
AA seq
392 aa
AA seq
DB search
MNILTSRTGRSLLLLAPLLIFLVGFFVWPLFSMMSQSVSDTAVLRLLPRSAEVLPNWDRV
SPPTPTMQTALMEDLKAVNDDQALGDMVRRLNSARSGFRTLMSKTTGALADAARQPTDLV
SIDKRWERPEFWLAIADALSPLTDRNLLAAVDLGRNTAGEIEHLPADQSVNRVILLRTFW
IAALVTLACACIGFPYAIIAASLTGWKRDLMLGAVLLPLWTSLLVRTAAWFILLQEKGLI
NDALQMLGIIDSPLPLIFNRTGVIIAMTHVLLPFMVLPIYSVLITIPKNLMPAAASLGAN
PLRAFLRVLLPLSLRGVASGALLVFISAIGYYITPALIGGPGDQMISSIIAFYAIGSANW
GMAGALGMVLLVATLVLYSVYARLSAEEPERY
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgaacattctcacctcgcgaaccgggcggtcgctgcttctgctggcacctctgctcatc
ttcctcgtcgggttcttcgtctggccgctgttcagcatgatgtcccagtccgtttccgac
accgccgtgttgcggcttttgccacgaagcgccgaggttctgccgaactgggatcgcgtt
tccccaccaaccccgaccatgcagactgcgttgatggaggatctcaaggccgtcaatgat
gaccaggcactgggcgatatggtgcggcgcctcaacagcgcgcgctccggctttcgcacc
ttgatgtcgaaaacaacaggtgcactggcagacgcggcgcgccagccgaccgatctcgtc
tcgatcgacaagcgctgggaaaggcctgagttctggctggcgattgccgatgctctatcg
ccgctaaccgaccgcaatctgctggccgccgtcgatctgggtcgcaatacggcgggcgag
atcgagcatctgcctgccgatcaatcggtcaatcgcgtcattttgctgcgcacgttctgg
atcgcggcgctggtgaccctcgcctgcgcctgcatcggctttccctatgcgatcattgcc
gcatccctgacgggctggaaacgggacctgatgctgggtgccgttctgctgccgctctgg
acatcgcttttggtgcgcacggcggcatggttcattctgttgcaggaaaagggcctgatc
aacgatgccctgcaaatgctcggcatcatcgacagcccactgccgctgatcttcaaccgc
acgggcgtcatcatcgccatgacccatgtgctgctacccttcatggtgctgccgatctat
tcggtgctgattaccattccgaaaaacctgatgcctgcggcagcgtcgctgggtgccaat
ccgctccgcgccttcctgcgcgttctgttgccgctcagtctgcgcggggtggcgtccggg
gctctgctcgtcttcatctcggccattggctactacatcacaccagcgctgatcggcggg
ccgggtgaccagatgatctcatccatcatcgcgttttacgccatcggctcggcaaattgg
ggcatggccggcgcgttgggcatggttctgctggtcgcgacactggtgctctacagcgtc
tatgcgcgactttcagcagaagaaccggagaggtactag
DBGET
integrated database retrieval system
