Agrobacterium vaccinii: HRR99_17140
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Entry
HRR99_17140 CDS
T08171
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
avq
Agrobacterium vaccinii
Pathway
avq03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
avq00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
HRR99_17140 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
avq03011
]
HRR99_17140 (rpsA)
Ribosome [BR:
avq03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
HRR99_17140 (rpsA)
Bacteria
HRR99_17140 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
Spt6_S1
PCB_OB
S1_2
DUF5446
Motif
Other DBs
NCBI-ProteinID:
UHS63319
LinkDB
All DBs
Position
linear:complement(452584..454284)
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AA seq
566 aa
AA seq
DB search
MSVATPTRDDFAALLEESFSSNDLAEGYVAKGIVTAIEKDVAIVDVGLKVEGRIALKEFG
ARSKDGGLKVGDEVEVYVERIENALGEAVLSREKARREESWVKLEAKFEAGERVEGVIFN
QVKGGFTVDLDGAVAFLPRSQVDIRPIRDVTPLMHNPQPFEILKMDKRRGNIVVSRRTVL
EESRAEQRSEIVQNLEEGQVVDGVVKNITDYGAFVDLGGIDGLLHVTDMAWRRVNHPSEI
LNIGQSVKVQIIRINQETHRISLGMKQLESDPWDGISAKYPVGKKISGTVTNITDYGAFV
ELEPGIEGLIHISEMSWTKKNVHPGKILSTTQDVDVVVLEVDPSKRRISLGLKQTLENPW
QAFAFSHPAGTEVEGEVKNKTEFGLFIGLEGDVDGMVHLSDLDWNRPGEQVIEEYNKGDT
VKAVVLDVDVEKERISLGIKQLGKDAVGEAATSGELRKNAVVSAEVIGVNEGGIEVKLVA
HEDITSFIRRNDLARDRDDQRPERFSVGQVLDARVVNFSKKDRKVMLSIKALEIAEEKEA
VAQFGSSDSGASLGDILGAALKGRTE
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtagctactcccacgcgcgacgatttcgcagcgctgctcgaagagtccttttct
tccaatgaccttgctgaaggctatgtagccaagggtatcgtcacggcgatcgaaaaagac
gttgcgatcgttgacgtcggcctcaaggtcgaaggccgcatcgcgctcaaggaattcggc
gcccgttccaaagacggcggcctcaaggtcggcgacgaagtcgaagtttacgttgagcgt
attgagaacgctctgggcgaagccgttctgtcgcgcgagaaggctcgccgcgaagagagc
tgggtcaagctcgaagccaagttcgaagctggcgaacgcgtcgaaggcgtcatcttcaac
caggtcaagggtggcttcaccgtcgatctggatggcgctgttgcgttccttccacgttcg
caggtcgacattcgtccgatccgcgacgttaccccgctgatgcacaacccgcagcccttc
gaaatcctcaagatggacaagcgccgcggcaacatcgttgtttcccgccgtacggttctc
gaagagtcccgagccgagcagcgttctgaaatcgttcagaacctcgaagaaggccaggtt
gttgacggcgtggtcaagaacatcactgattacggtgcgttcgttgacctcggcggcatc
gacggtctgctgcacgtcacggacatggcttggcgccgcgtcaaccatccttcggaaatc
ctcaacattggccagtcggtcaaggttcagatcatccgtatcaaccaggaaacccaccgc
atctcgctcggcatgaagcagctcgagtctgatccttgggatggcatctctgccaagtat
ccagttggcaagaagatttccggtacggtcacgaacatcaccgactacggtgcattcgtt
gagctggagccaggcatcgaaggcttgatccacatttccgaaatgtcctggaccaagaag
aacgtacaccccggcaagatcctgtccacaacacaggacgtcgacgttgtcgttctcgaa
gtcgatccttccaagcgtcgtatttcgctgggcctcaagcagacgcttgaaaacccatgg
caggcatttgcgttcagccatcctgccggcactgaagtcgaaggcgaagtcaagaacaag
accgaattcggcctgttcattggtctcgaaggcgatgtcgatggcatggttcacctgtcc
gacctcgactggaaccgtccaggcgagcaggtcatcgaggaatacaacaagggtgacacc
gtaaaggctgttgttcttgacgtagacgtcgagaaggaacgcatctcgctcggtatcaag
cagctcggcaaggacgctgtcggtgaagccgcaacgtctggcgaacttcgcaagaacgcc
gttgtttccgctgaagttatcggcgttaacgaaggtggcatcgaagtgaagctcgttgcc
catgaagacatcacgtccttcatccgccgcaacgacctggcccgcgatcgtgacgatcag
cgtccagagcgtttctcggttggccaggttctcgacgcccgcgtcgtcaacttctccaag
aaggatcgtaaggtcatgctttcgatcaaggctctggaaatcgcagaagagaaggaagct
gtcgctcagttcggttcgtccgatagtggcgcttcgctcggcgacatccttggcgcggct
ctgaagggtcgcaccgagtaa
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integrated database retrieval system
