Agrobacterium vaccinii: HRR99_17530
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Entry
HRR99_17530 CDS
T08171
Name
(GenBank) circadian clock protein KaiC
KO
K08482
circadian clock protein KaiC
Organism
avq
Agrobacterium vaccinii
Brite
KEGG Orthology (KO) [BR:
avq00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
HRR99_17530
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
DnaB_C
MEDS
AAA_16
AAA_24
RecA
IstB_IS21
NPHP3_N
nSTAND3
AAA_14
SLFN-g3_helicase
GvpD_P-loop
PAXNEB
AAA_7
AAA_22
AAA
AAA_19
AAA_5
AAA_30
ResIII
Mg_chelatase
Rad51
AAA_11
AAA_29
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
UHS63382
LinkDB
All DBs
Position
linear:536955..538457
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AA seq
500 aa
AA seq
DB search
MRDTDSKAITGVEGLDDILSGGLSRRHVFLLEGSPGTGKTTIALQFLIEGAANGERCLYI
SLSESEEELRDSAASHNMFLDENIYIFELVPPESLLDADQQQSLLYSSDLELGETTKLIF
GAFERLKPDRVVIDSLSEIRLLAQSSLRYRRQILAMKHYFSKSGATVLLLDDLTADVLDK
TVHSVVHGVIHLEELSPNYGPERRRVRILKYRGQAYRGGYHDFVIRTGGVAVFPRLRAIE
HKTSFTRDVLSSGIKRLDGLLGGGVNRGSSTLLIGPAGTGKSIFGIQFIDAAIKRGEKAA
MFIFDEELGLLFDRMKHLDIDLEKLRDSGHLYIEQLDAAELSPGEFAQRVREQVAKYDAK
TVLIDSINGYQAAMPEENALILHMHELLQFLNRQGANTFLTVAQHGLVGDMKSPVDVTYL
ADTVILLRYFEASGRVRRAVSVIKKRTGTHEDTIREYTITNEGLILGEPLYAFQGVLRGV
PFLMSENAGLTPADGSSENF
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgagagatacggatagcaaagcaattacgggcgttgaaggactggatgacattttatct
ggaggcctttcccggcgtcacgtgtttttgcttgaaggctctccgggcaccggcaaaacc
acgattgcgcttcagtttctgatcgaaggcgcggccaatggcgaacgctgcctctatatc
agcctgtcagaatccgaagaggaacttcgcgacagcgctgcgtcccacaacatgttcctt
gacgagaatatctacatcttcgaactggtgccgccagaaagcttgttggatgcagaccag
cagcagagcctgctttattcgtccgatctggagttgggtgaaacgaccaagttgatattc
ggcgcattcgagcgtctgaagccagatcgcgtcgtgatcgatagcctgtcggaaattcgc
ctgctggcgcagagttccctgcggtatcgtcgccagattctggccatgaagcattacttt
tcgaagtcaggcgcaactgtgcttttgctggacgatctgactgccgatgtccttgacaag
accgttcacagtgttgtccacggtgtcatccatcttgaggagttgtcaccgaattacggt
ccagagcggcgccgggtgcgcattctgaagtatcgcggtcaggcctatagaggtggctac
cacgattttgtcatccgcacaggcggcgtggcggtgtttccgcggctacgcgccattgaa
cataaaacgtcgttcacgcgcgacgttctgagcagcggcatcaagcgtctcgacggcctg
ctcggtggtggcgtcaaccgtggttccagcactttgctgatcggacctgccggtactggc
aagagtattttcggtattcagttcatcgatgctgcgatcaagcgcggcgaaaaggccgcg
atgttcattttcgatgaggagcttggactgctcttcgaccggatgaagcatctcgacatc
gaccttgaaaagctgcgtgattccggtcatctctacattgagcaactggatgcggctgag
ctttctccgggcgagtttgcgcaacgggtgcgtgagcaggtcgcgaaatacgatgccaag
acggtgctgatcgacagcatcaacggctatcaggcagcgatgcccgaagaaaacgcactg
atccttcacatgcacgaactgcttcagttcctgaacaggcagggcgcaaatactttcctg
accgttgcccagcacgggttggttggcgacatgaagtcccccgtcgatgtgacctacctt
gcagacacggtcattcttctccgatacttcgaggcatccggtcgcgttcggcgcgctgtt
tccgtgatcaagaagcgcacgggtacccacgaggatacgatccgggaatacaccattacc
aatgaaggcctcatccttggcgaaccgctttatgccttccaaggcgtgctgcgcggcgtc
ccgttcttgatgtctgaaaatgccggattgacaccggcggatgggagttcggaaaatttc
tga
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