Agrobacterium vaccinii: HRR99_18750
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Entry
HRR99_18750 CDS
T08171
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
avq
Agrobacterium vaccinii
Pathway
avq03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
avq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
HRR99_18750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
avq03400
]
HRR99_18750
DNA repair and recombination proteins [BR:
avq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
HRR99_18750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
UHS63602
LinkDB
All DBs
Position
linear:complement(806331..807143)
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AA seq
270 aa
AA seq
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MAVRPYWKGYLKLSLVNCAVQLTPATSESEKVRFHTLNRATNNRVVSHYVDSVTGKDVKE
ENEVKGYPRGEDDYMILEDEELENVALDSTRTIDISTFTKRDTIEWIWLDTPYYLSPNEK
VAQEAFSVIRDAMASQDMVGISRLVISRRERAVMLEPRGKGIVLWTLRYGDEVRDEDDYF
DSIGDEKPDSDLMALVQKLIKKQTQPWDAKMVVDPVQDRLLDIIKIKKKAQTKQTKTKAK
KPASSPGPSNVIDIMDALKKSVAKETRSRK
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atggctgttcgtccttattggaaaggctacttgaagctctcgctcgtcaactgtgcggtt
caactcacacctgcgacgtcggaaagtgagaaggtgcggtttcacacgctcaaccgtgcg
acgaacaaccgtgtggtgagccattacgtggattctgtcaccggaaaggacgtcaaagaa
gaaaacgaggtcaagggttacccgcgcggcgaggatgattacatgatccttgaagatgaa
gagcttgaaaatgtcgcgctcgacagcacccggaccatcgatatctcgacctttaccaaa
cgcgataccattgaatggatttggctggatacgccttactatctctcgccgaatgaaaag
gtggcgcaggaggcgttctccgtgatccgagacgccatggcctcgcaggacatggtcggg
atttcgaggcttgtcatttctagacgcgaacgcgccgtgatgctggagccgcgtggaaag
ggcatcgttttgtggactttgcgctatggtgatgaggtaagggacgaggatgactatttc
gacagcattggcgatgaaaaacccgacagcgacctgatggcgctcgtccagaaactcatc
aaaaagcagacccagccgtgggatgcgaaaatggttgtcgaccctgtacaagaccgctta
ctcgatatcatcaagataaagaaaaaggctcagacgaagcagacaaagaccaaagcgaaa
aagcctgcctcgtcgccgggtccgagtaatgtcatcgatatcatggacgcgctgaagaag
tctgtcgccaaggaaacgcgtagccggaaatga
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