Agrobacterium vaccinii: HRR99_19830
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Entry
HRR99_19830 CDS
T08171
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
avq
Agrobacterium vaccinii
Pathway
avq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
avq00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HRR99_19830
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avq02000
]
HRR99_19830
Transporters [BR:
avq02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
HRR99_19830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
UHS63794
LinkDB
All DBs
Position
linear:complement(1031265..1032842)
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AA seq
525 aa
AA seq
DB search
MFTRREVGSLLLAAGAVTLAGRVPLAQAQQRPTLNVAVDNLWATMAPINGISTTSRRIFP
NFYDTLVERDYINDENGLIFAPKLATKWEQKGNIWTFTLREGVKFHDGSEMTAEDAVFTL
SPERLWGEKPFEPRGKTFTAGFKRVEATGKYTFEIETAAPDPNIPAKLTGYIGFVVPKKY
YVEVGVDAFGQKPIGTGPYKVTTFRSGEIMVLDAFDEYWAGPPPAQKVNWKIIPEFAARM
AGLVSKEFDFIVNIPTDQEASLESYDGVTLKRVLADNYPAIAFNTRPDPVDNPLVDPNLR
YAMVQAIDMNAIVQALFNGTTEHPAVPFNFKEYGKFYDPNLPVKLPYDVEAAKALVAKTK
YKGETLIWHITRQFYPNYEAAAEIMIEQWREIGVNVQAQVLDNFELVYRRPYHMMNMSMS
SDFIPGDPYQPLWLDWGPTASRSTASWKTWDPTPEFLDLGKKFDSAIEFEERKAAYLALS
DEWQRVTPGYYMWKSVYNCAHRSGIEFRLKPNGEMRIYGDYFKLV
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgtttaccaggcgtgaagttggaagtctcctgctcgcagcaggcgcagtcacattggca
ggccgggtgccgttggcgcaggcccagcaacggcccacactcaacgtcgccgtcgataat
ctgtgggcgacgatggcaccgatcaacggcatctccaccacatcccgccgcatctttccg
aatttctacgatacgctggtcgagcgggattatatcaatgacgagaatggtttgatcttc
gcgcccaagcttgcaaccaaatgggagcagaagggcaatatctggacattcacccttcgc
gagggcgtgaaattccacgatggcagtgaaatgactgccgaggacgcggtcttcactttg
tcgccagagcgtctctggggcgagaaacctttcgaaccgcgtggcaagacatttacggcg
ggtttcaagcgggtcgaagcaaccggaaaatatacgttcgagatcgaaaccgccgcaccc
gatcccaacattccagccaagttgaccggctatatcggcttcgtggtgccgaagaaatat
tatgtggaagtgggcgtcgatgcctttggtcaaaagccgatcggtaccgggccctacaag
gtcacaaccttccgttctggcgagatcatggtcctcgatgcgttcgatgaatattgggcg
gggcctcctccggctcagaaggtcaactggaagatcattcccgaattcgctgcacgcatg
gccggtctggtctcgaaagagttcgacttcatcgtcaatattccgaccgaccaggaagcg
tcgctggaaagctatgatggtgttacgctgaagcgcgttctggcggataattacccagcg
attgcgttcaatacgcggccggaccccgtggacaatccgctggtcgatccgaacctgcgt
tatgccatggttcaggccatcgatatgaatgccattgttcaggcgttgttcaacggaacg
accgaacatccagctgtgcccttcaacttcaaggaatatggcaagttctatgatccgaat
ttgccggtcaagcttccctacgatgtcgaagccgccaaggcgctggttgccaagacgaaa
tacaagggtgaaacgctgatctggcatatcacgcgccagttctacccgaactacgaggcg
gctgccgaaatcatgatcgagcagtggcgcgaaatcggcgtcaatgtgcaggcgcaggtg
ctggataatttcgaactggtctatcgtcggccataccacatgatgaacatgtccatgagt
tcggacttcattccgggagacccgtatcagccgctctggctggattggggtccgacggca
tcgcgttcaacggcaagctggaagacctgggatccgacgcctgaattccttgatcttggc
aagaaattcgattctgcgatcgaattcgaggagcgcaaggctgcgtatcttgccctttcc
gatgagtggcagcgcgtcacgccgggctattacatgtggaagagcgtctataactgcgcc
caccgttccggcatcgagttccgcctcaagccgaacggcgaaatgcgcatctacggcgac
tacttcaagttggtgtga
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