Agrobacterium vaccinii: HRR99_21275
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Entry
HRR99_21275 CDS
T08171
Name
(GenBank) extracellular solute-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
avq
Agrobacterium vaccinii
Pathway
avq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
avq00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HRR99_21275
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avq02000
]
HRR99_21275
Transporters [BR:
avq02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
HRR99_21275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
UHS64043
LinkDB
All DBs
Position
linear:complement(1350905..1352194)
Genome browser
AA seq
429 aa
AA seq
DB search
MTTRSSIKKGLSRRGLLKAGAAATGAAIGSGLITGFPTIWAQNPITLRQFGTGVSNLNAI
AEKCKADLGITLEMTATDSDAAAQRAVTQPNSYDIADIEYWILKKVYPAGVIQPMEIKKL
KYYDKIVPLFKNGKLTPDSVIAQGTAPHTVGFVEKPGDKKFAKGETDYFTMVPTIYNADT
LGIRPDLVGREITSWADIMDPAFKGKASILNIPSIGIMDAAMIMEAMGNVKYADKGNMTK
EEIDKTIDFLIKAKKDGQFRAFWKSFDESVNLMASGEVVIQSMWSPAVAAVRSKGIACKY
QPLKEGYRSWGGGLGLAKHLSGAKLDAAYEYINWYTSGWVGAYLNRQGYYSAAMDTAKEH
MTADEWGYWVEGKAAQGDIIAPDGKIMEKAGAVRDGGSFQERMGKVACWNSVMDEDRYMV
RRWNEFIAA
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgaccactcgatccagcattaaaaaaggtctgtcccgtcgtggccttctcaaggcaggc
gcggcagcaaccggtgccgccatcggctccggcctcatcaccggcttcccgaccatctgg
gcacagaacccgattacactgcgtcagtttggcaccggcgtatcgaacctcaacgcgatc
gctgaaaagtgcaaggcggacctcggcatcacgctggaaatgacggcaacggattcggat
gccgctgcacagcgcgccgtaacccagccgaactcctacgacatcgccgacatcgaatac
tggattctcaagaaggtctatccggcaggcgtgatccagccgatggaaatcaagaagctg
aaatattacgacaagatcgtaccgctgttcaaaaacggcaagctgacgcctgacagcgtc
attgctcagggtacggcaccgcacaccgttggtttcgtggaaaagccgggcgacaagaaa
ttcgccaagggcgaaacagactatttcaccatggtcccgacgatctacaacgccgatacg
ctcggcattcgcccggacctcgtcggacgtgagatcaccagctgggccgatatcatggac
cccgcgttcaagggcaaggcatcgatcctcaacattccgtccattggcataatggatgct
gcaatgatcatggaagccatgggcaacgtcaaatatgccgacaagggcaacatgaccaag
gaggagatcgacaagacgatcgacttcctgatcaaggccaaaaaggacggccagttccgc
gccttctggaagagcttcgacgagagcgtcaacctcatggcatccggcgaagtcgtcatc
cagtccatgtggtcgcctgccgtcgccgccgtgcgttccaagggcatcgcctgcaaatac
cagccgctgaaggaaggttaccgttcatggggcggtggtctcggccttgccaagcacctg
tcaggcgcaaagctggatgctgcctatgaatatatcaactggtacacctccggctgggtc
ggcgcgtacctcaaccgtcagggttactactctgccgccatggatacggccaaggaacac
atgactgcggacgagtggggctactgggtcgagggcaaggccgcgcagggcgacatcatc
gctcccgatggcaagatcatggaaaaggccggtgcggtacgcgatggcggctccttccag
gagcgcatgggcaaggtcgcctgctggaactccgtgatggacgaagaccgctacatggtc
cgccgctggaacgagttcatcgcagcctga
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