Agrobacterium vaccinii: HRR99_21720
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Entry
HRR99_21720 CDS
T08171
Symbol
pcaQ
Name
(GenBank) pca operon transcription factor PcaQ
KO
K02623
LysR family transcriptional regulator, pca operon transcriptional activator
Organism
avq
Agrobacterium vaccinii
Brite
KEGG Orthology (KO) [BR:
avq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
avq03000
]
HRR99_21720 (pcaQ)
Transcription factors [BR:
avq03000
]
Prokaryotic type
Helix-turn-helix
LysR family
HRR99_21720 (pcaQ)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
SBP_bac_3
OpuAC
Motif
Other DBs
NCBI-ProteinID:
UHS64128
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Position
linear:complement(1458196..1459125)
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AA seq
309 aa
AA seq
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MVDARIKFRHIQTFVEIARQKSVVRAAAILRISQPAVTKTVRELEEVLGVTLFERDGRGI
KLSRYGEIFLKHAGATMTALRQAVDSVSPDAARIGTPLRIGALPTVSVSIMPQAMVSFLA
EDTGSTVKIVTGENAVLLEQLRVGDLDLVVGRLATPDKMTGFSFEHLYSEKVRFVVRAGH
PLLAENISIFERLNKFPVLTPTRNSVIGPVVDQFLLAHGVAPLPTRIETVSDAFGRAFLR
KSDAVWIISEGVVAADIADGTLAVLPLDTADTSGPVGLTMRADTQPSLPLSLLMQTIRET
AAALSSSRG
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggtagacgcccgcatcaaattccggcacatccagaccttcgtggaaatcgcacgccag
aaaagcgtggttcgggcggctgcaattttacggatcagccagccagccgttaccaaaacc
gtccgtgaactggaagaggtgctcggcgtgacactgttcgagcgtgacggacgtggcata
aagctcagccgttacggcgagatttttctcaaacatgcgggtgcgaccatgacggcgctg
cggcaggcagtggattccgtttcgccggatgcggccagaataggcacgcccctgcgcatc
ggcgccctgcccacggtgtccgtcagcatcatgccgcaggcgatggtcagctttctggcg
gaagataccggcagcacggtgaaaatcgtgacgggtgaaaacgccgttctcctagagcag
ttgcgggtcggagacctcgacctcgttgtggggcggcttgccacgccggataagatgacg
ggattttcgttcgaacacctctactcggaaaaagttcgctttgtcgttcgggccggtcat
ccactgcttgcagagaacatcagcattttcgagcggctgaacaagtttcccgttctgacg
ccaacgcgtaattccgtcatcggccccgtggtcgatcagttcctgctggcccatggcgtt
gccccactgcccacccgcatcgaaacggtctcggacgctttcgggcgcgcatttctgcgc
aaaagcgatgccgtatggatcatctccgaaggcgttgtcgctgccgatatcgcagacggg
acgcttgcggttcttccactcgataccgcagatacgagcggcccggtggggctgaccatg
cgcgccgatacgcagccatcgctaccgctttcgctgctgatgcagacaatccgcgagacg
gcagcggcgctatcatcctctcgcggctga
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