Agrobacterium vaccinii: HRR99_22330
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Entry
HRR99_22330 CDS
T08171
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
avq
Agrobacterium vaccinii
Pathway
avq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
avq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HRR99_22330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
avq03400
]
HRR99_22330
DNA repair and recombination proteins [BR:
avq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
HRR99_22330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
UHS64492
LinkDB
All DBs
Position
pB7.6:33157..33912
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AA seq
251 aa
AA seq
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MVEARVRVIDLETGGNGPNDVCEIGWQDVVIDHVGKWQVTEERGARFVNPGRPISPDTMA
IHHILDAQVADAPFWKEIASTVLRPPGRIDALAAHRAAFEQRYCTPRFTGGTPWICTWKC
ALRVWPQLPRFSNQMLRYQRMPDGLVHEIGLPAHRAMPDAYVTAHHLRDMLNQASLEDCM
AWSTEPGLLPRVPAGPDRGKPWDRISLETLNAFIADRDVDVRFSAQTELARRIEDKPSQD
EKPAQGMLGFE
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
gtggtcgaagccagggtacgcgtcatcgatctcgaaacaggcggtaatggcccgaacgac
gtttgcgagatcggctggcaggatgtcgtcatcgatcacgttggaaagtggcaggtcact
gaagagcgcggggcgcggttcgtcaaccctggccgtcccatctcacccgacacgatggcg
attcatcatatcctggatgcccaagtcgcggatgctcctttctggaaggaaatagcatca
accgttctccgtccacccggccgtatcgacgccttggcagctcatcgagccgctttcgag
caacgatattgcacaccgcggtttacaggcggaacgccttggatctgcacatggaaatgc
gcgctgcgtgtctggccacaacttccgcggttttccaaccagatgctgcgttatcaacga
atgcccgacggactggtgcatgaaatcggcctccccgcgcatagggcaatgcccgacgcc
tacgttacggctcatcacctccgcgacatgttgaaccaagcatcgcttgaggattgcatg
gcatggagcaccgaaccgggacttctaccgcgtgtgcctgccggaccggatcgaggaaaa
ccctgggatcgcatcagcctcgaaacactcaacgcgtttatcgcagatcgggatgtggac
gtgcgcttcagcgcacagacagaactggctcggcggattgaggacaagccgtctcaggat
gagaaaccggcacaagggatgcttggattcgaatga
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