Aeromonas veronii B565: B565_0080
Help
Entry
B565_0080 CDS
T01462
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
avr
Aeromonas veronii B565
Pathway
avr03420
Nucleotide excision repair
avr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
avr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
B565_0080
03430 Mismatch repair
B565_0080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
avr03400
]
B565_0080
Enzymes [BR:
avr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B565_0080
DNA repair and recombination proteins [BR:
avr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B565_0080
MMR (mismatch excision repair)
Other MMR factors
B565_0080
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
AAA_12
Motif
Other DBs
NCBI-ProteinID:
AEB48115
LinkDB
All DBs
Position
complement(93242..95413)
Genome browser
AA seq
723 aa
AA seq
DB search
MDVSTLLDGLNDKQRDAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMQVERCSPFSIIAV
TFTNKAAAEMRGRVEKVIGDGVRGMWIGTFHGIAHRLLRAHHLDAGLPQDFQILDSDDQY
RLIRRVLKALNLDEKHWAPRAVMGYINGKKDEGLRPGDIDLYGDPVTRTYQQIYETYQET
CDRSGLVDFAELLLRAHELWLNKPHILEHYRDRFQNILVDEFQDTNGIQYAWLRMLAGNS
GKVMIVGDDDQSIYGWRGAKIENIQRFLTDYQGAETIRLEQNYRSTANILKAANSVIANN
AERLGKELWTEGAEGEPISLYAAFNEVDEARFVVGRLKDWKEKGGLLADCAILYRSNAQS
RVLEEALMQDAMPYRIYGGLRFFERQEIKDAMAYLRLINNRGDDASFERVVNTPTRGIGD
RTLEILRGNARDQGLNLWQSAKALLNDKVLTGRAGNAVRGFVDLIDALEEQVSLLPLHQQ
ADIAIQNSGLKAMYLAEKGEKSQARVENLDELVTACRQYQRPDELEDMSDLSAFLAHAAL
ESGENQADEYADAVQLMTLHSAKGLEFPLVLLVGVEEGMFPSQQSTEESGRLEEERRLCY
VGMTRAMEKLYICYAESRRIYGREMFHKPSRFIREMPAECLEEIRLRTQVSRPTQYGRFS
QNEVQQSFDASGIKLGQRVLHPKFGEGVVLNFEGVGQQSRVQIQFDDVGAKWLVTAYARL
EAL
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcaaccctgctcgacgggctcaacgacaagcaaagagatgccgttgcggcg
ccccgcagcaacctgctggtgctggccggtgccggttcgggcaagacccgggtgctggtg
caccgtatcgcctggctgatgcaggtggaacgctgttcacccttctccatcatcgcggtc
acctttaccaacaaggcggcggccgagatgcgcggccgggtcgagaaggtgatcggcgac
ggcgtgcgcggcatgtggatcggcaccttccacggcatcgcccaccgtttgctgcgggcc
caccatctggatgcggggctgccgcaggatttccagatcctcgactccgatgaccagtac
cggctgatccgccgggtgctcaaggcgctcaacctcgacgagaagcactgggccccgcgc
gccgtgatgggctacatcaacggcaagaaagatgagggcttgcgccccggcgacatcgac
ctctacggcgaccccgtcacccgcacctatcagcagatctacgagacctatcaggagacc
tgcgatcgctccggtctggtggactttgccgagctgctgctgcgcgcccacgagctgtgg
ctcaacaagccgcacatcctcgagcactaccgcgaccgcttccagaacatcctggtggac
gagtttcaggataccaacggcatccagtacgcctggctgcgaatgctggcgggcaacagc
ggcaaggtgatgatcgtcggcgacgatgaccagtccatctacggctggcgcggcgccaag
atcgagaacatccagcgcttcctgaccgactatcagggcgccgagaccatccgcctcgaa
cagaactaccgctccaccgccaatatcctcaaagccgccaacagcgtcatcgccaacaac
gccgagcgccttggcaaggagctgtggaccgaaggggccgagggcgagccgatttcgctc
tacgccgccttcaacgaggtggacgaagcgcgcttcgtggtcggccgtctcaaggattgg
aaggaaaagggcggcctcctggccgactgcgccatcctctatcgctccaacgcccagtcg
cgggtgctggaagaggcgctgatgcaggacgccatgccgtatcgcatctacggcggcctg
cgcttcttcgagcgccaggaaatcaaagacgccatggcctacctgcgccttatcaacaat
cgcggcgacgacgccagcttcgagcgggtggtcaacaccccgacccgcggcatcggcgat
cgcaccctcgagatcctgcgcggcaacgcccgcgatcaggggctcaacctgtggcaatcg
gccaaggcgctgctcaacgacaaggtgctgaccggtcgcgccggcaacgcggtgcgcggc
tttgtggatctcatcgacgcgctggaggaacaggtctccctgctgccgctgcaccagcag
gcggatatcgccatccagaactccggcctcaaggcgatgtatctggcggaaaagggcgag
aaatcccaggcacgggtagagaacctggacgaactggtcaccgcctgccgccagtaccag
cgcccggacgagctggaagatatgagcgatctctccgccttcctcgcccacgcggcgctg
gagtccggcgagaatcaggcggacgaatatgccgatgcggtgcagctgatgacattgcac
agcgccaaggggctggagttcccgctggtgctgctggtcggcgtcgaagaagggatgttc
cccagccagcaatcgaccgaggagtcgggccggctggaggaggagcgccgcctctgttac
gtcggcatgacccgcgccatggagaagctctacatctgttatgccgagagccgccgcatc
tacggccgcgagatgttccacaagccgagccgctttatccgcgagatgcccgccgagtgt
ctggaagagatccggctgcgcacccaggtgagccgccccacccagtacggccgctttagc
cagaacgaggtgcagcagagcttcgacgccagcggcatcaagctcggccagcgggtgctc
catccgaaattcggggaaggggtggtactcaacttcgaaggggtcggccagcagagccgg
gtgcagatccagttcgacgacgtcggcgccaagtggctggtgacggcgtatgccagactg
gaagcgctttga
DBGET
integrated database retrieval system
