Aeromonas veronii B565: B565_0207
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Entry
B565_0207 CDS
T01462
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
avr
Aeromonas veronii B565
Pathway
avr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
avr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
B565_0207
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
avr03021
]
B565_0207
03400 DNA repair and recombination proteins [BR:
avr03400
]
B565_0207
Enzymes [BR:
avr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
B565_0207
Transcription machinery [BR:
avr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
B565_0207
DNA repair and recombination proteins [BR:
avr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
B565_0207
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
AEB48242
LinkDB
All DBs
Position
222559..223473
Genome browser
AA seq
304 aa
AA seq
DB search
MTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVEIDGVLHEYSSKEGVQEDILEILLNL
KGIAVKLEGKDEVTLSLTKSGTGPVTAGDITYGDEVEIVNPEHVICHLTGANAEISMRLK
VQRGRGYVPASARVHNDDEERPIGRLLLDSAFSPIVRIAYNVEAARVEQRTDLDKLVIDM
ETNGTLDPEEAIRRSATILAEQLEAFVDLRDVSVPEKKEEKPEFDPILLRPVDDLELTVR
SANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSLTEIKDVLASRGLSLGMRLENWPPAS
IADE
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
gtgactcttgagccactcgagcgtggctttggtcacacgctgggcaacgccctgcgtcgt
attttgctgtcatctatgcccggttgtgcagttactgaagtcgaaattgacggggtactg
catgagtacagcagcaaagaaggtgtacaggaagacattcttgaaatcctgctcaacctg
aaaggtatcgctgtgaagctggaaggcaaggacgaggtaactctgtccctgaccaagtct
ggaacaggccccgttaccgctggtgatatcacttacggtgatgaagtcgagatcgtaaac
ccggagcacgtaatctgccacctgacaggtgccaatgctgaaatcagcatgcgcctgaaa
gttcagcgcggtcgtggttatgtgcctgcttctgctcgtgttcacaacgatgacgaagag
cgcccgattggtcgcctgctgctggactctgcgttcagccccatcgttcgtattgcctac
aatgttgaggcagcacgtgtggaacagcgtaccgacttggacaagctggtcatcgacatg
gagaccaatggtaccctggatcctgaagaagccatccgtcgttctgccactattctggct
gagcaactggaagccttcgtggatctgcgcgatgtcagcgtgcccgagaagaaagaagag
aaacccgagtttgatccgattctgctacgtcctgtcgatgatttggagctgacagttcgt
tctgcgaactgtctgaaggcagaagctatccactatattggtgatctggtacagcgtacc
gaagttgagttgcttaagactcctaacctcggtaagaagtccctgactgagatcaaggac
gtgttggcctcccgtggtctgtctcttggcatgcgccttgagaactggccgcccgccagc
atcgctgacgagtaa
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