Aeromonas veronii B565: B565_0219
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Entry
B565_0219 CDS
T01462
Name
(GenBank) Exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
avr
Aeromonas veronii B565
Pathway
avr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
avr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
B565_0219
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
avr03400
]
B565_0219
Enzymes [BR:
avr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
B565_0219
DNA repair and recombination proteins [BR:
avr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
B565_0219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AEB48254
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All DBs
Position
240711..244079
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AA seq
1122 aa
AA seq
DB search
MFTLYHSNQLDLLKELLVSRIRQAPLSHPFDREQILVQSPGMAQWLKLELAKAFGIAANI
DFPLPASFIWEMFTRVLADVPRQSPYNKGSMSWQLMTILPALLERPAFAPLAAYLGGGDE
EDSARDPEQVRLWQLCQKVADLFDQYLVYRPDWIARWEEGEGLSQELAGVSGQDWQPELW
RELVARTLALSPSGYHRANLYEEFIHELARTADLPGKLPQRVFVFGISALPPRYVEALLA
LGSRPEVEVHLFVTNPCRYYWGDLLDRKTLARLETKLKPGTDIETLQGPANPLLASMGKL
GRDYLHQLMELEVPQIEAFVDIDEVDAKGNVSLLRAIQKDVLELAERGAGQFDLDSSHHK
SPIDPADGSLQIHACHGPMRELEVLHDRLLALFEQDPTLTPKDVVVMMPDVNSYGPYIQA
VFGKEKSGARGQIPFAVSDRAASQESPLLQSFLALLRLPNARFGAGELLAILEVPAVLRR
FELDDDEFNQLRVWVQETGIRWGLDDGYPVRFDLPPMSGNSWLFGLRRMLLGFAMGDGEP
VAGILPYADIEGQQGLALGKLAWFVDSLAEFLPRLQQAQPLAEWHACLLALLERFYLADE
DEERQLQLIRSQLVEWQTRLGEARFEQPITADLLQDYLGSVLGESRSSQRFLAGQVNFCT
LMPMRSIPFKQVCLLGMNDGVYPRTLAPMGFDLMAVASRRGDRSRRDDDRYLFLEALLSA
QQGLYISYQGFSAQDNSDKVPSVLLAELIDYVRQGFVLVGDEDLDDETSGKRLLNHLMVA
HPLTPYSRNYFYPEAGSRLFTYAADWLPALNPVRGAANFQSGELPLPPEWGKEQGLELAE
LLRFYRQPTKYFLNRRLKVWFELNEANIEDSEPFELDGLQHYQLKDLLLDAHLAEGDSTE
RRERLQLTGLLPQGWFGSLLLDDLDAEMGKLADRLRPWIAADESEKQAVEIDISLTQGQL
QGWIDTQKGRLLVVKPGSFNGKDLLLGWIQHLCLSLSSVPGDTLLFDAKQSLRLPKLSAD
EARPKLAALVACWAQGMKRPLPFFPNTAWDWLKAIEKDPDKPEAADKAALTRFNGGWMIN
GEGQDVYVARCFPELDDEVLGQLQALAREHLTPLLKTLEELK
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgtttaccctctaccactccaatcagctggatctgctcaaagagctgctggtgagccgc
atccggcaggcccctctctctcaccccttcgatcgggagcagatcctggtgcagagtccg
ggcatggcccagtggctcaagctggagctggccaaagccttcggcattgccgccaatatc
gactttccgctgcccgccagctttatctgggagatgttcacccgggtgctggcagatgta
ccgcgccagagtccctacaacaagggctccatgagctggcagctgatgaccattctgcct
gccttgctggagcgccccgcctttgccccgctcgccgcctatctgggcgggggagatgag
gaggattccgccagggatcccgagcaggtgcggctgtggcagctctgccagaaggtagcg
gatctctttgaccagtatctggtctaccggccggactggatcgcccgttgggaagagggg
gaaggattgagtcaggagctggccggggtgagcggtcaggactggcagccggagctgtgg
cgcgagctggtggcccgcaccctggcgctctctccgagtggctaccaccgcgccaacctc
tacgaggagtttatccacgagctggcacgcactgccgatctgccgggcaagctgccgcag
cgggtctttgtgttcggcatctcggcgctgccgccgcgctatgtggaggcgctgctggcc
ctcggcagccggccggaggtggaggtgcacctgttcgtcaccaacccctgccgctactac
tggggggatctgctggatcgcaagacgttggcgcgcctcgaaaccaagctcaagcccggt
accgatatcgagacattgcagggccccgccaacccgctgctcgcctccatgggcaagctg
gggcgcgattacctgcatcagctgatggagctggaggtgccgcaaatcgaggctttcgtc
gatatcgacgaggtggacgccaagggcaatgtcagcctgctgcgcgccatccagaaggat
gtgctggagctggccgagcgaggcgccggtcagttcgatctcgacagcagccaccacaag
agccccatagatccggcggatggatccttgcagatccacgcctgccacggcccgatgcgc
gagctcgaagtgctgcacgaccggctgctggcgctgttcgagcaggacccgaccctcacc
ccgaaagatgtggtggtgatgatgccggatgtgaacagctacggcccctatattcaggcc
gtgtttggtaaagaaaagagtggcgcgcgcggtcagatcccgtttgcggtctcggatcgg
gcggcgagtcaggagagcccgctgctgcaaagcttcctcgccctgctcaggctgcccaac
gcccgctttggggcgggggagctgctcgccattctcgaggtgcccgccgtgctgcgccgc
ttcgagctggatgacgacgagttcaaccagctgcgggtctgggtgcaggagaccggcatc
cgctgggggctggacgacggctaccctgtccggttcgatctgccgcccatgtccggcaac
agctggctgttcggcctgcgccgcatgctgctcggctttgccatgggggatggcgagccg
gtggcgggcatcctgccctacgccgatatcgagggtcagcaggggctggcacttggcaag
ctcgcctggtttgtcgactcgctggccgagtttctgccccggctgcaacaggcgcagccg
ctggccgagtggcacgcctgcctgctggcgctgctggagcgcttctatctggccgacgag
gatgaagagcgtcagctccagctcattcgcagccagctggtcgagtggcagacccggctc
ggcgaggctcgcttcgagcagcccatcaccgccgacctgttgcaggattacctcggcagc
gtgctgggagagtcccgctccagccagcgcttcctcgccggtcaggtgaacttctgcacc
ctgatgccgatgcgctccatccccttcaagcaggtctgcctgcttggcatgaacgacggc
gtctacccgcgcaccctggcccccatggggttcgatctgatggcggtggcgtcgcggcgc
ggggatcgctcccgtcgcgatgatgaccgctacctcttcctcgaggcgctgctcagcgcc
cagcaggggctctatatcagctatcagggcttcagcgcgcaggacaacagcgacaaggtg
ccatcggtgctgctggcggagctgatcgactatgtgcggcagggctttgtgctggtgggg
gatgaggatctcgacgatgaaacctccggcaagcggttgctcaaccacctgatggtggcg
catccgctcaccccctacagccgcaactacttctacccagaggcgggttcgcgcctcttt
acctatgccgccgactggctgcccgctctcaatccggtgcgcggtgcggccaacttccag
agcggcgagctgcctttacctcccgaatggggcaaggagcaggggctggagctggcggag
ctgctgcgcttctatcgccagcccaccaaatatttcctcaaccgccgcctcaaggtgtgg
tttgagctgaacgaagccaatatcgaggacagcgagccgtttgagctggatggcctgcaa
cattatcagctgaaagatctgctgctcgatgcccatctggcggaaggggatagcaccgag
cgtcgcgagcggttgcaactcaccggcctcttgccgcaagggtggttcggcagcctgctg
ctggacgatctggatgccgagatgggcaagctggcggatcggctgcggccatggattgcg
gccgatgagtcagaaaagcaggcggtggagatcgatatctccctcactcagggccagctg
caagggtggatcgacacccagaaggggcgcttgctggtggtcaaacccggcagcttcaac
ggcaaggatctgctgctgggctggatccagcacctctgcctctcattgagcagcgtcccc
ggcgacaccctgctgttcgatgccaaacagagtctgcgactgcccaagctctctgccgac
gaggcgcggcccaagctggcggcgctggtggcgtgctgggcgcaggggatgaagcggccg
ctgccgtttttccccaacaccgcctgggattggctcaaggcgatcgagaaggatcccgac
aagccggaggcggccgacaaggcggccctcacccgtttcaacggcggctggatgatcaat
ggggaggggcaagacgtttacgtcgcccgctgcttccccgaactcgatgacgaggtgctg
gggcagttgcaggcgctggcccgcgaacacctgaccccgctgttaaagaccctggaggag
ctgaaataa
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