Aeromonas veronii B565: B565_0493
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Entry
B565_0493 CDS
T01462
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
avr
Aeromonas veronii B565
Brite
KEGG Orthology (KO) [BR:
avr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
avr03009
]
B565_0493
Enzymes [BR:
avr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
B565_0493
Ribosome biogenesis [BR:
avr03009
]
Prokaryotic type
rRNA helicases
B565_0493
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
P-loop_SecA
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AEB48528
LinkDB
All DBs
Position
complement(549292..550671)
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AA seq
459 aa
AA seq
DB search
MNNSEFSSLNLSPALQENLTSLGYLQMTPIQAQSLPLVLDGKDLIAKAKTGSGKTAAFGL
GLLAKLNVNRLEVQALVLCPTRELADQVAQEIRRLARALPNVKLVTLCGGTPTAPQSATL
SFGAHIAVGTPGRILKHLEQGTLELSGLKTLVLDEADRMLDMGFGEDINRVISYAPERRQ
TLLFSATYPEGIAQMSRGVQRNPVEVSVESLHEGSAIEQKLYEVPAGQRLDALTWLLSHY
QPSSCVVFCNTKRACNDVADHLAAKGFSALALNGDLEQRERDQVLVRFANGSATILVATD
VAARGLDIKELGAVINYELTYDPEVHVHRIGRTGRAGQQGLALSLYQPNEAQRVNFIEEY
QQAPMPLGDLDSIGRDIKPIAPQMVTLSIDAGRKTKVRAGDILGALTGEGGIAGADVGKI
QISEQYSYVAVKRSVASAALKRLQEGKIKGRSYRARKLG
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaacagcgaatttagcagcctcaatctctcccccgccctgcaagagaacctcacc
agcctgggttacctgcagatgaccccgatccaggcccagagcctgcccctggtgctcgat
ggcaaagacctgatcgccaaggcaaaaaccggcagcggcaagaccgccgccttcggcctc
ggcctgctggccaagctcaacgtcaaccgcctcgaagtgcaggcgctggtgctctgcccg
acccgcgaactggcggatcaggtggctcaggagatccgtcgtctggcgcgcgccctgccc
aacgtcaagctggtgaccctgtgcggcggcaccccgaccgcaccgcagtccgccaccctg
agctttggtgcccacatcgccgtcggcaccccgggtcgcattctcaaacatctggagcaa
ggcacgctggagctctccggcctcaagacgctggtgctggacgaagcggatcgcatgctg
gacatgggctttggcgaagatatcaaccgggtcatcagctatgcccccgagcgccgccag
accctgctcttctccgcgacctatccggaagggatcgcccagatgagccgcggcgtgcag
cgcaatccggtcgaggtgagcgtggagtccctgcacgaggggagcgccatcgaacagaag
ctctacgaagtgcctgccggtcagcgcctcgacgccctcacctggctgctgagtcactac
cagccaagctcctgcgtggtgttctgcaacaccaagcgcgcctgtaacgacgtggccgac
catctggccgccaagggcttctcggcgctggcgctgaatggcgatctggaacagcgcgag
cgggatcaggtgctggtgcgttttgccaacggcagcgccaccattctggtggccaccgac
gtggcggcccgcggcctcgacatcaaggagctgggcgccgtcatcaactacgagctgacc
tatgatccggaagtgcacgtgcaccgcatcggtcgtaccggtcgtgccggccagcagggt
ctggccctgagcctctatcagccgaacgaggcccagcgcgtcaactttatcgaagagtac
cagcaggccccgatgccgctgggagatctcgacagcatcggccgcgacatcaagccgatc
gccccgcagatggtgaccctctccatcgatgcaggccgcaagaccaaggtgcgggccggt
gacattctgggcgccctgaccggtgaaggcggcattgccggcgccgatgtgggcaagatc
cagatctccgagcagtactcctacgtcgcggtgaagcgcagcgtggcgagcgccgccctc
aagcggttgcaggaaggcaagatcaagggtcgcagctaccgcgcccgcaaactgggctaa
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