KEGG   Aeromonas veronii B565: B565_0564
Entry
B565_0564         CDS       T01462                                 
Name
(GenBank) ATP-dependent RNA helicase SrmB
  KO
K05590  ATP-dependent RNA helicase SrmB [EC:5.6.2.7]
Organism
avr  Aeromonas veronii B565
Brite
KEGG Orthology (KO) [BR:avr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:avr03009]
    B565_0564
Enzymes [BR:avr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     B565_0564
Ribosome biogenesis [BR:avr03009]
 Prokaryotic type
  rRNA helicases
   B565_0564
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 AAA_22 ERCC3_RAD25_C
Other DBs
NCBI-ProteinID: AEB48599
LinkDB
Position
complement(619713..620936)
AA seq 407 aa
MSQSFDDFDLHPALNRALAEMGFTRPTTIQQMVLEPALDGRDILASAPTGTGKTASFLLP
ALQHLLDFPRRKPGPCRMLILTPTRELALQVTAHAKALAAHTNLSIETIIGGVSHEEQLP
ALTKTTDIVVATPGRLLEYIEKEEFESHDIEVLVLDEADRMLDMGFIKDVNRIVAEARYR
KHTMLFSATLEGAGLEKFANEILKDPVELHAEPPRSERRPITQWIHLADDAAHKLALLTH
ILKDPETQKAIIFVKTRERLAELSGQLQAAGISCAWIRGEMEQSKRIESIRKFHEGEVPF
LIATDVAARGIDLPNVSHVINYDMPYGADVYVHRIGRTGRAGNRGCAISLVEAHDMAMVA
KIERYTEERLKRRVIDELRPKHKEARVPVKKKKPVDKKKSAKKKKKK
NT seq 1224 nt   +upstreamnt  +downstreamnt
atgagccagtcctttgatgatttcgacctgcaccccgccctcaaccgggccttggccgag
atgggattcacccgccccaccaccatccagcagatggtgctggagccagccctggacggc
cgcgatattctggcatccgctccgaccggtaccggcaagaccgcctctttcctgctgccg
gcactccagcacctgctggacttcccgcgccgcaagccgggcccctgccgcatgctgatc
ctgaccccgacccgcgagctggcgctgcaggtgaccgcccatgccaaggcgctggcggct
cacaccaacctcagcatcgagaccatcatcggcggcgtcagccatgaagagcagctgcct
gccctgaccaagaccaccgacatcgtggtcgccaccccgggccgtctgctcgagtacatc
gagaaagaggagttcgagagccacgacatcgaggtgctggtgctggacgaagcggaccgc
atgctggacatgggctttatcaaggatgtgaaccgcatcgtggcagaggcgcgctaccgc
aagcacaccatgctcttctccgccactctggaaggggccggccttgagaagttcgccaac
gagatcctcaaggatccggtggagctgcacgccgagccgccccgcagcgagcgtcgcccc
atcacccagtggatccatctggctgatgacgccgcccacaagctggcgctgctgacccat
atcctgaaagatccggaaacccagaaagcgatcatcttcgtcaagactcgcgagcgtctg
gcggagctctccggccagctgcaggctgcaggtatctcttgcgcctggatccgtggcgag
atggagcagagcaagcgtatcgaatcgatccgcaagttccacgaaggggaagtacccttc
ctgatcgccaccgacgtcgccgcccgcggcatcgacctgccgaacgtcagccatgtcatc
aactacgacatgccctacggcgccgatgtctacgtccaccggatcggccgtaccggccgc
gctggcaatcgtggctgcgccatcagcctggtggaagcccacgacatggcgatggtcgcc
aagatcgagcgctacaccgaggagcgcctcaagcgccgggtgatcgacgagctgcgcccg
aaacacaaggaagcacgggtaccggtgaagaagaaaaagccggtcgacaagaagaagtcc
gccaagaagaaaaagaagaagtga

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