Entry |
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Name |
(GenBank) ATP-dependent RNA helicase SrmB
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KO |
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Organism |
avr Aeromonas veronii B565
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Brite |
KEGG Orthology (KO) [BR:avr00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:avr03009]
B565_0564
Enzymes [BR:avr01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
B565_0564
Ribosome biogenesis [BR:avr03009]
Prokaryotic type
rRNA helicases
B565_0564
|
SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
complement(619713..620936)
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AA seq |
407 aa
MSQSFDDFDLHPALNRALAEMGFTRPTTIQQMVLEPALDGRDILASAPTGTGKTASFLLP
ALQHLLDFPRRKPGPCRMLILTPTRELALQVTAHAKALAAHTNLSIETIIGGVSHEEQLP
ALTKTTDIVVATPGRLLEYIEKEEFESHDIEVLVLDEADRMLDMGFIKDVNRIVAEARYR
KHTMLFSATLEGAGLEKFANEILKDPVELHAEPPRSERRPITQWIHLADDAAHKLALLTH
ILKDPETQKAIIFVKTRERLAELSGQLQAAGISCAWIRGEMEQSKRIESIRKFHEGEVPF
LIATDVAARGIDLPNVSHVINYDMPYGADVYVHRIGRTGRAGNRGCAISLVEAHDMAMVA
KIERYTEERLKRRVIDELRPKHKEARVPVKKKKPVDKKKSAKKKKKK |
NT seq |
1224 nt +upstreamnt +downstreamnt
atgagccagtcctttgatgatttcgacctgcaccccgccctcaaccgggccttggccgag
atgggattcacccgccccaccaccatccagcagatggtgctggagccagccctggacggc
cgcgatattctggcatccgctccgaccggtaccggcaagaccgcctctttcctgctgccg
gcactccagcacctgctggacttcccgcgccgcaagccgggcccctgccgcatgctgatc
ctgaccccgacccgcgagctggcgctgcaggtgaccgcccatgccaaggcgctggcggct
cacaccaacctcagcatcgagaccatcatcggcggcgtcagccatgaagagcagctgcct
gccctgaccaagaccaccgacatcgtggtcgccaccccgggccgtctgctcgagtacatc
gagaaagaggagttcgagagccacgacatcgaggtgctggtgctggacgaagcggaccgc
atgctggacatgggctttatcaaggatgtgaaccgcatcgtggcagaggcgcgctaccgc
aagcacaccatgctcttctccgccactctggaaggggccggccttgagaagttcgccaac
gagatcctcaaggatccggtggagctgcacgccgagccgccccgcagcgagcgtcgcccc
atcacccagtggatccatctggctgatgacgccgcccacaagctggcgctgctgacccat
atcctgaaagatccggaaacccagaaagcgatcatcttcgtcaagactcgcgagcgtctg
gcggagctctccggccagctgcaggctgcaggtatctcttgcgcctggatccgtggcgag
atggagcagagcaagcgtatcgaatcgatccgcaagttccacgaaggggaagtacccttc
ctgatcgccaccgacgtcgccgcccgcggcatcgacctgccgaacgtcagccatgtcatc
aactacgacatgccctacggcgccgatgtctacgtccaccggatcggccgtaccggccgc
gctggcaatcgtggctgcgccatcagcctggtggaagcccacgacatggcgatggtcgcc
aagatcgagcgctacaccgaggagcgcctcaagcgccgggtgatcgacgagctgcgcccg
aaacacaaggaagcacgggtaccggtgaagaagaaaaagccggtcgacaagaagaagtcc
gccaagaagaaaaagaagaagtga |