Aeromonas veronii B565: B565_1745
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Entry
B565_1745 CDS
T01462
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
avr
Aeromonas veronii B565
Pathway
avr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
avr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
B565_1745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
avr03400
]
B565_1745
DNA repair and recombination proteins [BR:
avr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B565_1745
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
B565_1745
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
UB2H
AAA_22
DUF87
Kinesin
Microtub_bd
DUF8810
Motif
Other DBs
NCBI-ProteinID:
AEB49780
LinkDB
All DBs
Position
1965113..1967125
Genome browser
AA seq
670 aa
AA seq
DB search
MSKLFKLASQFQPAGDQPTAIAQLLDGIESGLAHQTLLGVTGSGKTFTMANVIATLNRPT
MILAPNKTLAAQLYGEMKEFFPDNAVEYFVSYYDYYQPEAYVPTTDTFIEKDASINDHIE
QMRLSATKALLERRDVVIVASVSAIYGLGDPQAYLSMMLHLKVGDVINQRDILRRLAELQ
YTRNDMAFQRGTFRVRGEVIDIYPAESDKLALRVELFDEEVERLSQFDPLTGAIEQTVVR
YTIYPKTHYATPRETILGAIEHIKEELRSRREQLLSLNKLVEEQRISQRTQFDMEMMQEL
GYCSGIENYSRYLSGRAPGEPPPTLFDYLPGDGLLIIDESHVTVPQIGAMFKGDRSRKET
LVEYGFRLPSALDNRPLKFDEFEALMPQTVFVSATPGPYELEKSGGDVVQQVVRPTGLLD
PEIEVRPVTTQVDDLLSEIRKRVAVEERVLVTTLTKRMAEDLTEYLAEHDVKVRYLHSDI
DTVERVEIIRDLRLGKFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSTRSLIQTIG
RAARNLNGKVILYGDTITNSMKVAIEETERRRALQHAHNLKHGITPKGLNKSIGDVMDMG
GSRTAGKPGKGMRKAAEPQGEYHVRSASEIAKEIKRMEEQMFQHARDLEFEQAAALRDQI
QQLRSELIES
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaattgttcaagttagccagccagtttcaacccgccggggatcagcccacggcg
attgcccaactgctggatggtatcgagtcggggctggctcatcagactctgctcggggtg
accggttcgggcaagaccttcaccatggccaacgtcatcgccaccctgaaccgcccgacc
atgatcctggctcccaacaagaccctggccgcccagctctatggtgagatgaaggagttc
ttccccgacaacgcggtggagtatttcgtctcctactacgactattaccagcccgaagcc
tatgtgccgaccaccgacacctttatagagaaggatgcctcgatcaacgatcacatcgag
cagatgcgattgtccgccaccaaggcactgctggagcggcgcgacgtggtgatcgtcgct
tcggtgtcggccatctatggtttgggggatccccaagcttatctgagcatgatgctgcat
ctcaaagtgggggatgtgatcaaccagcgggatatcctgcgtcgcctcgctgagctgcag
tacacacgcaacgacatggcgtttcaacgcggcaccttccgggtgcgcggtgaagtgatc
gacatctaccctgccgaatcggacaagttggccctgcgggtagagctgtttgatgaggag
gtggagcggctctcccagttcgatcctctgaccggcgccatcgagcagacggtagtgcgc
tacaccatctatcccaagacccactacgccaccccgcgcgaaaccattctgggggctatc
gagcatatcaaggaggagctgcgcagccgccgcgagcagctgttgtccctcaacaagctg
gtggaagagcagcgcatcagccagcgtacccagttcgacatggagatgatgcaggagctg
ggttactgctccggcatcgagaactacagccgctacctttccggtcgtgcgccgggggag
ccgccgcccaccctgtttgactacctgccgggggatggcctgctcatcatagacgagtct
cacgtcacggtgccgcagatcggtgccatgttcaaaggggaccgctcccgcaaggagacc
ctggtggagtacggcttccggctcccctcggcgctcgacaaccggccgctcaagttcgac
gaatttgaagcgctgatgccgcagactgtgtttgtttcggcgactcccggcccctacgag
ctggagaagtccggcggcgatgtggtgcagcaggtggtgcgccctaccggcctgctcgat
ccggagatcgaggtgcgtccggtgaccactcaggtggacgatctgctctccgagatccgc
aagcgggtggcggtggaggagcgggtgctggtcacgaccctgaccaagcggatggcggaa
gacttgaccgagtatctggcggagcacgacgtcaaggtgcgctatctccactctgatatc
gatacggtcgaacgggtggagatcatccgcgatctgcgccttggcaagttcgatgtgctg
gtcggcatcaacctgctgcgggaaggtctcgacatgccggaggtgtcgctggtggcgatt
ctggatgcggataaagagggcttcctgcgttcgacccgctcgctgatccagaccatcggc
cgtgcggcgcgtaacctcaacggcaaggtcattctctacggcgataccatcaccaactcg
atgaaggtagccattgaggagaccgagcggcgccgcgccttgcagcatgcccataacctc
aagcatgggatcacccccaaagggctcaacaaatccattggcgatgtgatggacatgggg
ggcagccgcacggcaggcaaaccaggcaaggggatgcgcaaggcagccgagccgcaaggg
gaataccatgtccgctctgccagcgagattgccaaagagatcaagcggatggaggagcag
atgttccaacatgcccgggatctggagttcgaacaggcggcggcactgcgggatcagatc
cagcagttgcgcagcgagttgattgagtcatga
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integrated database retrieval system
