Entry |
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Name |
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KO |
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Organism |
avr Aeromonas veronii B565
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Brite |
KEGG Orthology (KO) [BR:avr00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:avr03016]
B565_1888
Enzymes [BR:avr01000]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
B565_1888
Transfer RNA biogenesis [BR:avr03016]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
B565_1888
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
2110556..2111668
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AA seq |
370 aa
MHYQLITQQDELEQYLASLADVPLAIDTEFVRTRTYYPQLGLFQIYDGEHLALLDPLTLD
LSALWQRLGRAGQIAILHASGEDLELIQHQAGHLPNQMHDTQLATAFLGYGVSVGFGALV
NEFLGVELEKDQARTDWLARPLTPRQLEYAAADVFYLMPLYEKVMAKLRESGKFAWFEQE
CQNHSARKTQGSDPRQAYLEIVNAWQLGRRELAILRELAAWRQQEAVRRDLALNFVVKEL
HLFKVAERRPASLRDLNELGLSPIEIKIHGKRMLDILAKAQQSAPDSWPEPIRRLVDFPQ
YKAELKRIKAMVEDKAKASNIPPELIASKKIIHQYFTWSWRMNDEERARSDKPMLLQGWR
HELVGHLLAQ |
NT seq |
1113 nt +upstreamnt +downstreamnt
atgcactatcaacttatcactcagcaagacgaacttgagcagtatctcgcttctctggcc
gacgttcccctggctatcgatactgaattcgttcgcacccgtacctactacccccagctt
ggtctgttccagatctatgacggcgagcatctggcgctgctggatccgctgaccctggat
ctctccgccctctggcaacgactgggccgagcagggcagatcgccatcctgcacgcctct
ggcgaagatctggagcttatccagcatcaggcgggccacctgcccaaccagatgcacgac
acccagcttgctaccgcctttctcggttacggcgtctcggtcggctttggtgcgctggtg
aatgaattcctcggggtcgagctggaaaaagatcaggcgcgcaccgattggctggcccgc
ccgcttacgccacgtcagctcgaatacgcggcggcggatgtcttctacctgatgccgctc
tacgagaaggtgatggccaaactgcgggaaagcggcaagtttgcctggttcgagcaggag
tgccaaaaccactccgcccgcaagacccagggtagcgatccccgtcaggcatatcttgaa
atcgtcaacgcctggcaactgggtcgccgcgagctcgccattctgcgcgagctggccgcc
tggcgccagcaagaggcggtgcgccgggacctggccctcaattttgtggtgaaagagctg
cacctgttcaaggtggcggagcgtcgtcctgcctccctgcgggatctcaacgagctcggc
ctctcgcccatcgagatcaagatccacggcaaacggatgctcgatatcctcgccaaggcg
cagcagagcgctcctgacagctggcccgagcccattcgccggctggtggacttcccccag
tacaaggccgagctcaagcgcatcaaggccatggtggaagataaggccaaggcgagcaat
attccgcccgagctgattgccagcaagaagatcatccaccagtacttcacctggagctgg
cggatgaatgacgaagagcgggcccgcagcgacaagccgatgttgctgcaagggtggcgt
catgagctggtcggtcacctgctggcacaataa |