Aeromonas veronii B565: B565_2264
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Entry
B565_2264 CDS
T01462
Name
(GenBank) GGDEF/eal domain protein
KO
K18765
RNase E specificity factor CsrD
Organism
avr
Aeromonas veronii B565
Brite
KEGG Orthology (KO) [BR:
avr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
avr03019
]
B565_2264
Messenger RNA biogenesis [BR:
avr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
B565_2264
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
ZER1-like_2nd
RPN13_C
Motif
Other DBs
NCBI-ProteinID:
AEB50299
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All DBs
Position
2556054..2557757
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AA seq
567 aa
AA seq
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MLCSASLVKIPPQSSHFKDDKMVHKLGRTLFLIATIVTIPLLLLQAVWLALQSTPLTLAI
ILATTLLGMILLLMLAIRTMDGMLQHQELIWVKAIRGRDPSQLDEPASQEVLQQLLEQFE
SAEQSAHRQLTELSNLATTDELTQLLNRHAFRRDMTELLQRDQDTQTATLVLIRATELGK
INAQRGFQSGDAYIKDMAALIKRVVSRFPGNQVYRISGADFAVLVQPVANIPPHLLGQDL
KVAFDHYQDQHELESTGYSGLTKLSSGQKIEAVLARADLALARAQTETINGWAIQQDDSA
SDLQGQHHWRDVLTEVLAQERLSFTYQPIQPLHRSMLAYNEIYTRFSGNDGTALPTDTLF
AMAQRLDMVMRLEQLVITHIMRQYRAFGANQSRWGINLSPNLLQNSAFLIWLDRQLLKDP
NTSANLVFELDEEHLERNLTGAKRVFELLRRNGSRSAIANFGKGIGSFTLFRELKPDYIK
LDPALITGLEQDQTNQQFVRMIVDVSHRMGCQVIAEGVEQLGQKQLLQGMYVDGLQGYLI
ARPQPLRPDISQLGLFTEDASASKGSE
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgctttgctccgccagcttggttaaaattcccccacaaagcagccacttcaaggatgac
aagatggttcacaagctcggacgtaccctctttctgatcgccaccatagtgaccataccc
ctgctgctcctgcaagcagtttggttggcccttcagagcacaccgctcactttggccatt
attctggccaccacactgcttggcatgatcctgctgttgatgttggccatacgcaccatg
gatggcatgctccagcatcaggagctcatctgggtcaaggcgatcagggggcgggatccc
tcacaactcgatgagcccgcctcccaggaggtgctgcaacagctgctggaacagttcgaa
agcgccgagcagagcgctcatcgccagctgaccgagctcagcaatctggccaccacagac
gagctgactcagctactcaaccgccacgcgtttcgccgcgacatgaccgagttgctgcag
cgggatcaggacacccagaccgcgaccctggtgctgatccgtgccaccgagcttggcaag
atcaacgcccagcgcggcttccagtctggtgatgcctatatcaaggacatggccgctctc
atcaagcgggtggtaagccgcttcccgggcaatcaggtctaccgcatttcgggggctgat
ttcgccgtgctggtgcaaccggtggccaatattcctccccatctgctggggcaggatttg
aaggtggccttcgatcactatcaggatcagcacgagctggagagcaccggttactcgggg
ctgaccaagctcagcagcggccagaaaattgaagccgtgctggccagagcggatctggcg
ctggctcgcgcccagaccgaaactatcaacggctgggccatccagcaggatgacagcgcc
tccgatctgcaggggcaacaccactggcgcgacgtgctgaccgaagtgctggcgcaggag
cggctcagctttacctatcagccaatccagcccctgcaccgcagcatgctggcttacaac
gagatctacacccgcttcagcggcaatgacggcactgccctgcccaccgacaccctgttt
gccatggcccagcggctggatatggtgatgcggctggagcagctggtcattacccacatc
atgcgccagtaccgggcctttggtgccaaccagagtcgctgggggatcaacctctccccc
aacttgctgcaaaacagcgccttcctgatctggcttgaccgccagctgctcaaagatccc
aataccagcgccaatctggtgttcgaactggatgaagagcatctggagcgcaacctgacc
ggcgccaagcgggtgtttgaactgctgcgccgcaacggcagccgctcggccatcgccaat
ttcggcaaagggatcggctcctttaccctgtttcgcgagctcaagcccgactatatcaag
ctggaccctgccctgatcaccgggctggagcaggatcagaccaaccagcagttcgtgcgg
atgatcgtcgatgtatcacatcggatggggtgtcaggtgattgcagagggggtagaacag
cttggccagaaacagctgctgcaggggatgtacgtggatggtttgcagggctatctgatc
gcccggccgcaaccgctgcgaccggatatcagccagctggggctctttactgaggatgct
tcagcttcaaaagggtcagaatga
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