Aeromonas veronii B565: B565_2310
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Entry
B565_2310 CDS
T01462
Name
(GenBank) 30S ribosomal subunit protein S1; site specific RNA helicase; component of the degradosome
KO
K02945
small subunit ribosomal protein S1
Organism
avr
Aeromonas veronii B565
Pathway
avr03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
avr00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
B565_2310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
avr03011
]
B565_2310
Ribosome [BR:
avr03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
B565_2310
Bacteria
B565_2310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
PCB_OB
SecA_PP_bind
Motif
Other DBs
NCBI-ProteinID:
AEB50345
LinkDB
All DBs
Position
complement(2601697..2603367)
Genome browser
AA seq
556 aa
AA seq
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MIESFAQLFEESLNAVETRQGSIVKGTVVAIENGFVLVDAGLKSESAIPAEEFKNAMGEL
EINVGDTVDVALDSIEDGFGETKLSREKAKRHEAWLQLEKAYEEQATVIGIINGKVKGGF
TVELNGIRAFLPGSLVDVRPIRDTAHLENKELEFKVIKLDQKRNNVVVSRRAVIETENTS
ERESLLANLQEGQEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE
IAVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPETTRLSGRVTNLTDYGCFVEIEEGV
EGLVHVSEMDWTNKNIHPSKVVNVGDVVDVMVLDIDEERRRISLGLKQCKSNPWQLFAET
HAKGDRVSGKIKSITDFGIFIGLDGGIDGLVHLSDISWNNQGEEAVREFKKGDEIEAVVL
QVDPERERISLGVKQIEEDPFNKYLADNKKGAIVKGKVTEVDAKGAIIELADGVEGYLRA
SDAARDRVEDATLVLSVGDEVEAKFMGVDRKNRTVSLSVRAKDEADERVAIDNLNQQEEV
VFSNAMMEAFKAAKGE
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaatcttttgctcaactctttgaagagtccctgaacgccgttgaaacccgtcaa
ggttccatcgtcaagggtactgtcgttgctatcgagaacggtttcgtactggttgacgcc
ggtctgaaatccgagtccgctatcccggctgaagaattcaagaacgccatgggcgagctg
gaaatcaacgtcggcgacaccgttgacgtggctctggactctatcgaagatggtttcggc
gaaaccaagctgtcccgcgaaaaagccaagcgccacgaagcttggctgcagcttgagaag
gcttacgaagagcaagctaccgttatcggtatcatcaacggcaaggtcaagggtggtttc
accgttgaactgaacggcatccgtgccttcctgccgggttctctggttgacgtgcgtccg
atccgtgacaccgctcacctggaaaacaaagaactcgagttcaaagtcatcaagctggac
cagaagcgcaacaacgttgttgtttcccgtcgtgccgtgatcgagaccgagaacacctcc
gagcgcgaaagcctgctggctaacctgcaagaaggtcaagaagttaagggtatcgtcaag
aacctgaccgactacggtgcattcgtagatctgggcggtgttgacggcctgctgcacatc
accgacatggcgtggaagcgcgttaagcatccttccgaaatcgtcaacgttggcgacgag
atcgctgtcaaggttctgaagttcgaccgcgagcgtacccgtgtatccctgggtctgaag
cagctgggcgaagatccctgggttgctatcgccaagcgttacccggagaccacccgtctg
tctggccgcgtgaccaacctgaccgactacggctgcttcgttgaaatcgaagaaggcgtt
gaaggcctggtacacgtatccgagatggattggaccaacaagaacatccacccgtccaaa
gttgttaacgttggcgacgtggttgacgtgatggttctggacatcgacgaagagcgtcgt
cgtatctccctgggtctgaagcagtgcaaatccaacccgtggcagctgtttgccgaaact
cacgccaaaggcgaccgtgtttccggcaagatcaagtccatcactgacttcggtatcttc
atcggtctggatggcggcatcgacggcctggttcacctgtctgacatctcctggaacaac
cagggcgaagaagccgtgcgtgaattcaagaaaggcgacgagatcgaagccgttgttctg
caagtggatccggagcgtgagcgcatctccctgggtgtcaagcagatcgaagaagacccg
ttcaacaagtacctggctgacaacaagaaaggtgctatcgtgaagggtaaggttaccgag
gttgatgccaaaggtgccattatcgaactggctgatggcgtagaaggctacctgcgtgcc
tccgacgctgctcgtgaccgtgtagaagacgccactctggtgctgtctgttggtgacgaa
gttgaagctaaattcatgggcgttgatcgtaagaaccgcaccgtaagcctgtctgtccgt
gctaaggacgaggctgatgagcgtgttgctatcgataacctgaaccagcaagaagaagtt
gtgttcagcaatgctatgatggaagcgttcaaagccgccaagggtgagtaa
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