Aeromonas veronii B565: B565_3140 Help Entry B565_3140         CDS       T01462                                  Name (GenBank) putative DEAD/DEAH box helicase   KO K03724   ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] Organism avr  Aeromonas veronii B565 Brite KEGG Orthology (KO) [BR:avr00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:avr03400]     B565_3140 Enzymes [BR:avr01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      B565_3140     5.6.2.6  RNA 3'-5' helicase      B565_3140 DNA repair and recombination proteins [BR:avr03400]  Prokaryotic type   Other factors with a suspected DNA repair function    DNA helicases     B565_3140 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD Helicase_C ResIII Motif Other DBs NCBI-ProteinID:  AEB51175 LinkDB All DBs Position complement(3537177..3541616) Genome browser AA seq 1479 aa AA seqDB search MTAEDLTRLHAALDVLEGREAELLVWGDTEGAFTDADILSLFAHHFPDENGKVLMQDLQD AAMLFSIPNTQGMRLYRTRMAESVHLFRHQRQWFRGQQLSRTRTLVADYRFIRRPRSYPA RIHPAEEVLNQWSDVEWMNDIKRQALRALIGDFSIAGFQSRATARILRAWDFHSGHTHIK EPTATIVCAGTGSGKTLAFYLPALTSLINDLQRDRSTRVRTLALYPRNELLKDQFMETWG KCREVDNQAVKLSGRKIRIGAYFGDTPYSAQKVATDKKDQDLPFGFLRCNTPKCQGEMRW KAEDIRHGKEILRCTHCTHSVGEDEVVLTRVSLMSSPPDILFTTTEMLNQHLGNNQANHL FGVGINVIAPPVVLLDEVHTYSGNSGAQTAYLLRRWMQLARCRPHFVGLSATLSDAERFF ADLVGANKKHVMLIEPAFQEMVDEGAEYLLALRGDPVSQTALLSTTIQTSMLARRIMDTR KARSQGTWGRKTFVFTDDLDINNRLYHQLCDAEGWRTRGQQLVPNETPLAAQRNESNGVA DALTLAGQNWRMPIDIGHPLDNLDRAIVARTSSQDAGVNPKAEVVVATASLEVGFNDPSV GVVIQHKAPRNVASYLQRKGRAGRSRTMRPWMIVVLSEFGRDRVVYQRYEELVAPEIKSQ SLPLGNIHIQKMQAAMATLDWLSIKIAKSNIWSLLNNPPKSAAQHGQLERMLNLISAVLE QNTWQQELEQYLFYALKITESQLQRVMWSPPRSIMMELLPTLKRQLTTQWSLMGIPGADR TAGRSPLPSFIPAALFSELNLPELGIQLERRFKKHEYLPFIQGLREFAPGRISKRYAIYS DLEADWLVPKNFVPLMDEVSDVDFDINEAFGETWQPECLIGRPDAPPLRVIRPLQVHTRA LDFKQNLTEKSNSQLQWHTHFAADAQAEAMAIPSGPWASALQSVTFYTHQHMTPLELTRY ATTASASLRSKRKQRALVNFRWVENGQPVGVGARQWVDGMKLCFTLSEMLNKEAMRDARL SGSLRTLYFHHCIRCEAKFENDSFIADWVFECYLAALTKEIANHHTVSDALLALQTHEGR ESLASIADSLFQAENIFENNDECDNNAERQELQQQLRSLFKDPKLIGMLDRHSAVFTDEL SENPHFCQWLQTLLINTLSGAVKHTSQLLLPDVDERGLLVDAVLHGEQLEVWLTESEPGG CGIITRFEEAFHNDPVAVLNLFIRSFAASDYEQIDDDLFALLSQLPSNEVLRRALSDLRN ADSHQARRAANGQLRAQLKKQGFALSHSFMSVLHTRILRPGSQASHDEQLLEHLRKWREL EAKAGYEISLNIFAHTQATQELPSANVTKIFNRFCQIQGRLWQRGNTLRQSILSYYNPFD NGPKLTERLLLSTLFQQSATQIKVTDSDWLQQIHATIAREGFAELLIPREGRHQIVQTIS TLQTNPVEYFGLHLYPRLGAIDYQSSNIVLRIELAEALQ NT seq 4440 nt NT seq  +upstreamnt  +downstreamnt atgactgcagaggatttaacccgtctacatgcggcgctggacgtactcgaagggcgagaa gccgaactactggtctggggagacacggaaggtgcctttacggatgcggatattctgtcc ctgttcgcccaccattttcccgatgagaatggcaaagtgctgatgcaggatctacaagac gccgcgatgttgtttagcatccccaatactcagggaatgaggctttatcgcacgcgtatg gcggaatctgtccatctttttcgccatcagcgccagtggtttcgcggccagcaactgagt cgcacccggacgttggtggccgactatcgctttatccgccgcccacgcagttatcccgca aggatacatccggctgaagaggtgctgaaccagtggtccgacgttgagtggatgaacgac atcaagcgtcaggccttacgggcgctgataggtgatttctccatcgcaggttttcagtcc cgggcgactgctcgcatcctgcgtgcatgggattttcacagcggccatacgcacatcaaa gaacctacggccaccatcgtttgtgcaggcacaggcagcggtaaaacgctggcattttat ctgccagcgctgacttcactcatcaatgacctgcagcgcgatcgctcgacgcgagtccgc acgctggctctgtatccccgtaatgaactgctcaaagatcagtttatggagacttgggga aaatgccgtgaagtggacaatcaggcggttaaactttccgggcgtaaaatccgcattgga gcttactttggcgatacgccttacagtgctcaaaaagtggctaccgataaaaaagatcag gatcttcctttcggctttctgcgctgtaacacgcccaaatgccaaggcgaaatgcgctgg aaagccgaggatatccgccatggcaaagagatactgcgctgtacgcactgtacacacagc gtgggtgaagatgaggtggtgctcactagagtctcactgatgagcagtccgccagatatt ttgttcaccaccactgaaatgcttaaccagcacctcggcaacaaccaagccaaccacctg tttggcgtaggcataaatgtgattgcgccgccagtggtgctgctcgatgaggttcatact tactctggcaatagcggagcacaaactgcctatctgttgcgacgctggatgcaactggcg cgctgtcgcccgcactttgtcggcctatctgcaacccttagtgatgcagaacgtttcttc gcagatcttgtgggtgccaacaaaaaacatgtcatgctgattgagcccgctttccaagag atggtggatgaaggggctgagtacctgctggcactgcgtggcgatcctgtttcgcaaacg gcgctgctttctaccactatccagaccagcatgctggcccgtcggatcatggatacccgt aaagccagatcacagggtacctggggacgcaaaacatttgtctttaccgacgatctggat atcaataaccgcctgtatcatcaactttgcgacgccgaggggtggcgtacacgtgggcag caactggtgcccaatgaaacccctctggcggcgcagcgtaacgaaagcaatggggtagca gatgcgctaactctcgctggtcaaaactggcgaatgcctatcgatattgggcaccctctt gataatctcgatagagccattgtggcgagaacttcaagccaggatgctggggtgaatccc aaagctgaagtggtcgtcgctacagcctcgctggaagtcggttttaacgatccctccgtc ggcgttgtcattcaacacaaagcaccgcgcaatgtcgcttcttatcttcagcgcaaaggc cgcgccggtcgttccagaacgatgcgcccctggatgatcgtggtactgtcggaattcggt cgtgaccgcgtggtgtatcagcgctatgaagaattggtggcgccagaaataaagagccag tcgctgccacttggcaatatccatattcagaaaatgcaggcggcaatggcgacgctggac tggctgagcatcaagatcgccaaaagtaatatctggtcactgctgaacaatccgcccaaa agcgcagcgcagcacgggcaactggaacgcatgctcaacctgatttccgccgtgctggaa caaaatacttggcaacaagagttggagcagtacttattctacgcgctcaaaatcaccgag tcgcaacttcagcgcgtcatgtggtcgccgccgcgttccattatgatggaattgctaccg actctgaaacgccaattgacgacccagtggtcgctgatgggcatccccggtgcagacaga acagcgggtcgctctccgctaccttcatttattccggcagccctcttcagtgaactgaac ttacctgagttgggcatccaactcgagcgtcgttttaaaaaacatgaatacctaccgttt attcaggggttgagggagtttgctccgggccgtatttccaaacgctacgccatttattcc gatctggaggccgactggctggtgccgaaaaattttgttccattgatggacgaggtatcg gacgtcgatttcgacatcaatgaagcatttggcgaaacctggcaaccagagtgtctgatt ggacggccggatgcaccaccgctgagggtgattcggcctttacaggttcacacccgagcc cttgatttcaagcaaaatctgaccgagaaaagcaactcgcagttgcaatggcatacccac tttgccgctgacgcccaggctgaagcgatggcgattccctccgggccatgggcgtcagcg ttgcagtcagtgactttttatacccaccagcatatgacgccgcttgagttaacgcgttat gccaccacagcaagcgcttcgcttcgcagtaaaagaaaacaaagagccttggttaacttt agatgggttgagaatggtcagcctgtgggggtgggcgctcgccagtgggtcgatggcatg aaactgtgcttcacactgtctgaaatgttgaataaagaggcgatgagagatgctcggtta tcaggatcactgaggacgctatattttcaccactgtattcgttgtgaggcaaaattcgaa aacgacagtttcatcgctgactgggtctttgaatgctatctggcagcgttgacgaaagag attgccaaccaccacacagtatctgacgcacttctggcgctgcaaacacatgagggtaga gagtcgctggcgagcattgctgattcgctgtttcaggcggagaacatttttgaaaataat gatgaatgtgacaacaatgcagagcgccaagagttgcagcagcaactgagaagcttgttt aaagatccaaaactgatagggatgcttgataggcatagcgcagttttcaccgacgaactc agcgaaaatccccatttttgtcagtggttgcagacactgctgatcaatactttatccggc gcagtcaaacacaccagccaactgctgcttcctgacgtggacgagcggggactactcgtc gatgccgtgctccacggagagcaactcgaggtctggctgaccgaatctgagcctggtggt tgcgggatcatcactcgcttcgaagaggcgttccataacgatccggtcgccgtactgaat ctgttcatccgcagtttcgcggccagtgactatgagcagattgatgacgatctcttcgcg ttgctttcacaacttccatcaaacgaagttctacgacgggcgctgagtgatttgcgcaac gctgacagtcatcaggcgcgtagggcggcaaacgggcaattgcgtgcgcaacttaaaaag caaggatttgccctttcccatagctttatgtccgtgctacacacccgaatcctacgacca ggaagccaggcgtctcatgacgaacaactgctcgagcatcttcgcaaatggcgggaactg gaggcgaaagcaggctatgaaatcagcctcaatatcttcgctcatacgcaggccacacag gagttgcctagcgcaaacgtcaccaaaatatttaaccgtttttgccagattcagggaagg ctctggcaacggggtaatacgcttcgccagtcaatactcagctactacaatccgttcgat aatggaccgaaactgacggaaagactgctgctcagcacgcttttccagcagtcagcgact caaattaaggtgaccgacagcgattggttgcagcaaatccacgcaacgatagcccgcgaa ggattcgctgaactgctgatccctcgagaaggccgccatcaaattgtacagactatctct acgctacagacgaacccagtggagtatttcggtctgcatctttatccacgacttggagcg attgactatcagagcagcaatatcgtattgcgaattgaacttgcggaagccctgcagtaa

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