Aeromonas veronii B565: B565_3390
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Entry
B565_3390 CDS
T01462
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
avr
Aeromonas veronii B565
Pathway
avr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
avr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B565_3390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
avr03019
]
B565_3390
03110 Chaperones and folding catalysts [BR:
avr03110
]
B565_3390
03029 Mitochondrial biogenesis [BR:
avr03029
]
B565_3390
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
avr04147
]
B565_3390
Enzymes [BR:
avr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
B565_3390
Messenger RNA biogenesis [BR:
avr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
B565_3390
Chaperones and folding catalysts [BR:
avr03110
]
Heat shock proteins
HSP60 / Chaperonin
B565_3390
Mitochondrial biogenesis [BR:
avr03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
B565_3390
Exosome [BR:
avr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
B565_3390
Exosomal proteins of other body fluids (saliva and urine)
B565_3390
Exosomal proteins of breast cancer cells
B565_3390
Exosomal proteins of colorectal cancer cells
B565_3390
Exosomal proteins of bladder cancer cells
B565_3390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AEB51425
LinkDB
All DBs
Position
complement(3820335..3821969)
Genome browser
AA seq
544 aa
AA seq
DB search
MAAKDVKFGNEARIKMLEGVNILADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI
ELEDKFQNMGAQMVKEVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGI
DKAVVAAVAELQALSQPCADSNAIAQVGTISANSDEKVGKLIAEAMDKVGRDGVITVEDG
QGLEDELAVVEGMQFDRGYLSPYFINKQETGSVELDDPFILLVDKKVSNIREMLPVLEGV
AKAGKPLLIVAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIAVLTGGTV
ISEEVGMELEKATLEDLGRAKRIVITKENTTIIDGVGDAGVIEGRVAQIRQQIEETSSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALV
RVAAKLAGLRGDNEDQNVGIKVALRAMEAPLRQIVINAGEEASVIANAVKNGEGNFGYNA
YSEQYGDMLAMGILDPTKVTRSALQFASSIAGLMITTECMVTELPKKDTPAMPDMGGMGG
MGMM
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagacgttaagtttggtaacgaagcccgcatcaagatgctggaaggcgta
aacatcctggctgatgccgtcaaggttactctgggcccgaaaggccgcaacgtggtgctg
gacaagtccttcggcgccccgaccatcactaaagatggtgtttctgttgcgcgcgaaatt
gagctggaagacaagttccagaacatgggcgcccagatggtcaaggaagtggcttccaag
gcgaacgatgccgccggtgacggtaccactactgcaaccgttctggctcaggccatcgtt
aacgaaggtctgaaagccgttgccgccggtatgaatccgatggatctgaagcgcggtatc
gacaaagccgttgtggctgctgttgccgagctgcaagcgctgtcccagccgtgcgctgac
agcaatgctatcgctcaggtgggcaccatctccgccaactccgacgaaaaagtgggcaag
ctgattgctgaagccatggacaaagtgggtcgcgatggcgtcatcaccgttgaagatggt
cagggtctggaagatgagctggcagttgttgaaggtatgcagttcgaccgcggctacctg
tccccctatttcatcaacaagcaagagaccggttctgttgaactggacgacccgttcatc
ctgctggttgacaagaaagtctccaacatccgcgaaatgctgcctgtgctggaaggcgtt
gccaaagctggcaagccgctgctgattgttgctgaagacgtggaaggcgaagccctggcg
actctggtggtcaacaccatgcgcggtatcgtgaaagtggctgccgtcaaggcgcctggc
ttcggtgatcgtcgcaaggccatgctgcaggatatcgctgtactgactggcggtaccgtc
atctctgaagaagttggcatggagctggaaaaagcgactctggaagatctgggtcgtgcc
aagcgcatcgtcatcaccaaagagaacaccaccatcatcgatggcgtgggtgatgccggt
gtgatcgaaggccgtgttgcccagatccgtcagcagatcgaagagacctcttccgactac
gatcgtgagaagctgcaagagcgcgtagccaagctggctggcggtgttgccgtgatcaag
gttggcgcagccaccgaagtcgagatgaaagagaagaaagcacgcgttgaagatgccctg
cacgctacccgcgccgctgttgaagaaggcgtggttgccggtggtggtgttgcgctggtt
cgcgttgctgccaaactggcgggtctgcgcggtgacaacgaagaccagaacgtcggtatc
aaggttgccctgcgcgccatggaagccccgctgcgtcaaatcgtcatcaacgccggtgag
gaagcctccgtcattgccaacgcagtgaagaacggcgaaggtaacttcggttacaacgct
tacagcgaacagtatggcgacatgctggccatgggcatcctggatccgaccaaggtaacc
cgttccgccctgcagtttgcctcttcaatcgctggtctgatgatcaccaccgagtgcatg
gtcaccgaactgccgaagaaagatacccctgccatgcctgacatgggcggcatgggtggc
atgggcatgatgtaa
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