Aeromonas veronii B565: B565_3478
Help
Entry
B565_3478 CDS
T01462
Name
(GenBank) DNA-binding transcriptional activator
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
avr
Aeromonas veronii B565
Brite
KEGG Orthology (KO) [BR:
avr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
avr03000
]
B565_3478
Transcription factors [BR:
avr03000
]
Prokaryotic type
Helix-turn-helix
LysR family
B565_3478
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
Motif
Other DBs
NCBI-ProteinID:
AEB51513
LinkDB
All DBs
Position
complement(3912776..3913708)
Genome browser
AA seq
310 aa
AA seq
DB search
MSHLNYNHLYYFWMTQKKGSVTQAAEALFLTPQTVTGQIKLLEQRLGGKLLKRKGRSLEA
TELGQLVFRYADKMFSLSYEMLDIVNYRKESQILFDVGIADALSKRLASRVLLSVIPNDG
SIHLRCFESTHELLLEQLSEHKLDMILSDCPVDSSQHAGLLSKRLGGCGVSFFCKAPLPE
KPFPACLEERKLLIPGRRTAMGRQLTQWFEQQGVSPSILGEFDDAALMKAFGFFNQGIFM
APTIYREEILEGEGVMLIGETQDLMEEYYVIFAERMIQHPAVKRVCESDFTFLFSGQENF
SAIQPATLSF
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaccttaactacaaccatctctactatttctggatgactcagaagaagggctcc
gttacccaggcagcggaagccctttttttgaccccgcaaaccgtcaccggtcagatcaag
ctgctggagcagcgcctcggtggcaagctgctcaaacgcaaggggcgctcccttgaggca
accgagctgggccagctggtatttcgttatgccgacaagatgttcagcctctcctacgag
atgcttgatatcgtcaactaccgcaaggagagccagatcctgttcgacgtcggcatcgcc
gatgcactctccaagcgcctggccagccgcgtgctgctctctgtcatccccaatgatgga
tccatccatctgcgctgtttcgaatcgacccacgaactgctgctggagcagctgagcgaa
cacaagctcgatatgatcctctccgactgtccggtggactccagccaacatgcggggctg
ctctccaagcggttgggcggctgtggcgtcagcttcttctgcaaggcgccattgcccgaa
aagccttttcccgcctgtctggaagagcgcaagctactgatccccggtcgccgtactgcc
atggggcgtcagctgacccagtggttcgagcagcagggggtttctcccagcattcttggc
gagtttgatgatgccgccttgatgaaggcgtttggcttcttcaatcagggcatcttcatg
gctcccaccatctatcgggaggagatcctcgagggggagggggtgatgctgatcggggaa
acccaggatctgatggaggagtattacgtcatcttcgccgagcggatgatccagcatccg
gcggtgaagcgggtctgcgagagcgattttacctttctcttttccggccaggagaacttc
tccgccatccagccggccaccctgtcgttttaa
DBGET
integrated database retrieval system
