Aeromonas veronii B565: B565_3672
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Entry
B565_3672 CDS
T01462
Name
(GenBank) Msha biogenesis protein mshh
KO
K18765
RNase E specificity factor CsrD
Organism
avr
Aeromonas veronii B565
Brite
KEGG Orthology (KO) [BR:
avr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
avr03019
]
B565_3672
Messenger RNA biogenesis [BR:
avr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
B565_3672
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GAPES4
GGDEF
Motif
Other DBs
NCBI-ProteinID:
AEB51707
LinkDB
All DBs
Position
complement(4128952..4130826)
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AA seq
624 aa
AA seq
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MATVLIGGVFSFRELGMELQQKKVDALVEVLDKQLDVAHDMEDMSHWLPTLLRAAHVVEL
EVRQNNQRVYWFRDVRNPVDEQLLQPYSHPLPHQAGMQANFKLERPFKEAEYSIKAMSGI
SLGIFIVVFGLWYSIRWLRQQLRGAELLGIRAQLILDDKLSKLSHDPAEEWPVAASQALD
HLLAELADARKERSRFDNFIRSNAFVDKMTGIGNRLFFDNRLESAIMEASVMSGGVLLID
LACLEELEADQFELLGHDLMMEASATIGAFVRKHNGALQARYAGQVFAVLLPNMSESEMV
DSANQLLKSLQRLHWPQEVNPETAVYLGAVCYQAEDSLLKVQEEAELALKSARLQGHNGW
FLYEKQLDEEQSSKGTVRWRTLISRRLEEHGIEFYTQPIQQDRGQVVLQQELLTYLHDEQ
GRALQAGIFMPMAEKVGLLLQLDRLVAEQTLALLRQRSEQSCPISLTLSAQSLLNREFQR
WLFFALFQLPRSTNERLILQLSESQVTRHFEALKRPLRSLRMLGCQLAIDHAGQDVVSTQ
YIKEFEINFLKLHPSLVREIHARQVNQMAVRSLVGGCANTRTRVLAVGVESGDEWKMLRH
LGVHAGQGPWFAEPQRLVLEPAGD
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgtgctgattggcggggtgttcagctttcgcgagctgggcatggagttgcag
caaaagaaggtcgatgcgctggtcgaagtgctcgacaagcagctcgatgttgctcacgac
atggaagatatgagtcactggctgcccaccctgctgcgggctgcccatgtggtagagctg
gaggtgcgccagaataaccagcgggtctactggttccgcgatgtgcgcaatccggtcgac
gaacagctgctgcaaccatacagccacccgctgccccatcaggccggcatgcaggccaac
ttcaaactggagcgccccttcaaggaggcggaatactccatcaaggcaatgtccggcatc
tcgctggggatctttatcgtggtgttcggtctctggtactccatccgctggctgcgccag
cagttgcgcggggccgagctgctgggcattcgtgcccagctgatcctcgatgacaagctc
tccaaactgagccatgaccccgccgaagagtggccggtggccgccagtcaggccctcgat
catctgctcgccgagctggctgatgcccgcaaggagcgcagccgcttcgacaacttcatt
cgcagcaacgctttcgtcgacaagatgaccggcattggcaaccggctgtttttcgacaac
cggctggagagcgccatcatggaggcgagcgtgatgagcggcggcgtgctgctgatcgat
ctcgcctgtctggaggagctggaggccgatcagttcgagttgttggggcacgatttgatg
atggaggcgagcgccaccataggtgccttcgtgcgcaaacacaacggtgccctgcaggcc
cgctatgccggtcaggtttttgcggtgttgctgcccaatatgtccgagagcgagatggtg
gatagcgccaaccagctgctcaagagcctgcaacggctgcactggccgcaggaggtcaac
cccgagacagcggtttatctcggcgccgtctgttatcaggcagaagacagcctgctcaag
gtgcaggaggaggcggagctggccctcaagagtgcccggctgcaaggccacaacggttgg
ttcctctacgagaagcagctggatgaggagcagagcagcaaggggacggtacgctggcgc
accctgatcagccgccgtctcgaagagcacggcatcgaattttatacccagccgatccag
caggatcgggggcaggtggtgttgcagcaggagctgctcacctatctgcacgacgagcag
ggacgggctttgcaggcggggatcttcatgccgatggcggagaaggtgggcttgttgctg
caactggatcggttggtggcggagcagaccctcgccctgctgcgccagcgctccgagcag
agctgccccatcagtctgaccctcagtgcccagagcctgctcaaccgcgagttccagcgc
tggctcttcttcgccctgttccagctgccgcgcagcaccaacgagcggctgatcctgcaa
ctctcggaatctcaggtgacccgccacttcgaggcgctcaagcggccgctgcgctccctg
cggatgctgggctgccagctggccatcgatcatgccggtcaggatgtggtgagcacccag
tacatcaaggagttcgagatcaacttcctcaagctgcaccccagcctggtacgggaaatc
catgcccgtcaggtcaaccagatggcggtacgtagtctggtcggtggctgcgccaatacc
cgcacccgggtgctggcagtgggggtggagagtggcgacgagtggaagatgctgcgccac
ctcggggtgcatgccgggcagggaccctggtttgccgagccccagcggctggtgctggaa
ccggctggtgattga
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