Aeromonas veronii B565: B565_3871
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Entry
B565_3871 CDS
T01462
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
avr
Aeromonas veronii B565
Pathway
avr03030
DNA replication
avr03410
Base excision repair
avr03420
Nucleotide excision repair
avr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
avr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B565_3871
03410 Base excision repair
B565_3871
03420 Nucleotide excision repair
B565_3871
03440 Homologous recombination
B565_3871
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
avr03032
]
B565_3871
03400 DNA repair and recombination proteins [BR:
avr03400
]
B565_3871
Enzymes [BR:
avr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
B565_3871
DNA replication proteins [BR:
avr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
B565_3871
DNA repair and recombination proteins [BR:
avr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
B565_3871
NER (nucleotide excision repair)
GGR (global genome repair) factors
B565_3871
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AEB51906
LinkDB
All DBs
Position
complement(4360378..4363143)
Genome browser
AA seq
921 aa
AA seq
DB search
MAPSNPLILVDGSSYLYRAFFASQQADLRTSTGLPSGAVRVMANMMRSLRKQYPDCHVAV
VFDAKGKTFRDDIYPEYKATRASMPDDLRSQVAPIHQMIKAMGFPFLMVEGVEADDVIGT
LARQATEKQLPVLISTGDKDMAQLVSDHVTLIDTMKDVKTDREGVIEKFGVPPELIIDYL
ALMGDKVDNIPGMTGVGEKTALALLQGIGSIDDIAANLDKVAALGFRGSKAFADKFREQE
EQVRLSYRLATIKTDVELEQSLEELLLKPVDKESLLAVYREYELRNLIKELESGGEEGSE
SAGQDEAGDESAAPVAAIETDYRCILDEAEFDGWLEQLKAAPLFAFDTETTSLDYMEARI
VGVSFAVEAGKAAYVPFGHDYLGAPVQLSEAVVLGKLKPLLEDPTCLKVGQNLKYDRNVL
LNHDIDLQGIAYDTMLESYVLNSTASRHDMDSLAKRYLGVETTSFEDIAGKGVKQLTFNQ
IELEQAAPYAAEDADITLRLHQTLWGQLEAVPGLAKVFSEIELPLLPVLARMELLGTTID
PKLLHQQSQEIELRLAELEKQAHELAGQEFNLSSPKQLGEILFTKLGLPIIKKTPKGAPS
TAEEVLAELAETYELPQLLMEHRGLAKLKSTYTDKLPLMIKPQTGRVHTSYHQAVAATGR
LSSSDPNLQNIPVRNEQGRRIRQAFIPSAGYKLVAADYSQIELRIMAHLSGDKGLLTAFA
EGKDIHKATAAEVFGVAIDAVTTDMRRSAKAINFGLIYGMSAFGLAKQLGIGRAEAQKYM
DLYFERYPGVLEYMERTRQQAEAQGYVETLFGRRLYLPDIKSRNAGLRKAAERAAINAPM
QGTAADIIKRAMINVDSWIRGIEDESIRMLMQVHDELVFEIREEKLEEYIAIIKEKMSAA
AELDVPLVVEAGTGDNWDQAH
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggcccctagcaacccccttattctggtcgacggctcctcttatctttaccgcgccttc
ttcgcctcccagcaggctgatctgcgcacatcgaccggtttgccgagcggcgccgtccgt
gtcatggccaacatgatgcgcagcctgcgcaagcaatatcctgattgtcatgtggccgtg
gtgtttgatgccaagggcaagaccttccgcgatgacatctatcccgagtacaaggcgacc
cgtgccagtatgccggacgatctgcgcagccaggttgcgcctatccaccagatgatcaag
gcgatgggcttccccttcctgatggtggaaggggttgaagccgacgacgtgatcggcact
ctggcccgccaggcgaccgagaagcagctgccggtgctgatcagcaccggtgacaaggat
atggcacagctggtctccgaccatgtcaccctgatcgacaccatgaaagatgtgaagacc
gatcgggaaggggtgatcgagaagtttggcgtgccgcccgagctcatcatcgactatctg
gccctgatgggtgacaaggtcgacaacattcccggcatgaccggtgtcggcgagaagacc
gcactggccctgctgcaggggattggcagcatcgacgatattgccgccaacctcgacaag
gtggccgcgctcggctttcgcggctccaaggcgtttgccgacaagttccgcgagcaggag
gagcaggttcgtctctcctatcgactggcgaccatcaagaccgacgtcgaactggaacag
agtctggaagagctgttgctcaagccggtcgacaaggagtccctgctggcggtctatcgc
gaatacgagctgcgcaacctgatcaaggagctggaatccggtggtgaagagggcagcgag
agcgccggacaggacgaagctggcgatgagagcgccgctccggttgccgccatcgaaacc
gactaccgctgcattctggacgaagccgagtttgacggctggctggaacagctgaaagcg
gcaccgctgtttgccttcgataccgaaaccaccagtctcgactatatggaggcgcggatc
gtcggcgtctccttcgcggttgaagcgggtaaggctgcttatgtaccgtttggccatgac
tatctgggggcaccggtacagctgagcgaggccgtggtgctcggcaagctcaaaccgctg
ctggaagatccgacttgtctcaaggtagggcagaacctcaagtacgatcgcaacgttctg
cttaaccatgacatcgacctgcagggcattgcctacgacaccatgctcgagtcctacgtg
ctcaactccaccgccagccgccacgacatggattcgctggccaagcgttacctcggggtc
gagaccacctcctttgaagatattgcgggcaaaggagtgaaacagctcaccttcaaccag
atcgagctggagcaggccgctccctatgcggcggaagatgccgatatcactttgcgcttg
caccagaccctgtggggtcagctggaggccgtgccgggtctcgccaaggtattcagtgag
atcgagctgccgctgctgccggtattggcgcggatggagttgctcggcaccaccatcgat
cccaagctgctgcaccagcagagccaggagatcgagctgcgcttggcggagctggagaag
caggcccatgagctggccgggcaggagttcaacctctcctcgcccaagcagctgggggag
atcctcttcaccaagctgggcctgcctatcatcaaaaagacgccgaagggggcaccgtcc
accgcagaagaggtgctggccgagctggcggagacctatgagctgccgcaactgctgatg
gagcaccgtgggctggccaagctcaagtccacctacaccgacaagttgccgctgatgatt
aagccgcagaccgggcgggtacacacctcctatcatcaggcggtagcggctacgggccgt
ttgtcatcatctgatcccaacctgcagaacatcccggtgcgcaacgagcaggggcgccgg
atccgtcaggcctttattccgagcgccggttacaagctggtggcggcggactactcccag
atcgaactgcgcatcatggcgcacctctccggtgataaggggctgctgaccgcctttgcc
gagggcaaggacatccacaaggcgaccgccgccgaggtgttcggcgtggcgatcgatgcg
gtcaccaccgatatgcgccgcagtgccaaggcgatcaacttcggcctcatctatggcatg
agtgccttcggtctggccaagcagttggggattggccgcgccgaagcgcagaagtacatg
gacctctacttcgaacgctacccgggcgtgctggagtatatggagcgtacccgtcagcag
gcggaagcccagggctatgtcgagaccctgtttggtcgtcgcctctatctgccggatatc
aagtcccgcaacgccggtctgcgcaaggcagccgaacgggccgccatcaacgcacccatg
cagggtacggctgccgacatcatcaagcgcgccatgatcaacgtggacagctggatccgc
ggtatcgaggatgagtcgatccgcatgctgatgcaggtacacgatgaactggtgttcgag
atccgcgaagagaagctggaggagtacatcgccatcatcaaggagaagatgtctgccgca
gccgaattagatgtgccgctggtggtggaggcgggcaccggtgacaactgggatcaggct
cactga
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