Aerococcus viridans: AWM76_03150
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Entry
AWM76_03150 CDS
T04270
Name
(GenBank) 5-hydroxymethyluracil DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
avs
Aerococcus viridans
Pathway
avs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
avs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AWM76_03150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
avs03400
]
AWM76_03150
Enzymes [BR:
avs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
AWM76_03150
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AWM76_03150
DNA repair and recombination proteins [BR:
avs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AWM76_03150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Zn_ribbon_SprT
Ribosomal_S13
Zn_ribbon_IS1595
DZR
Zn_ribbon_6
DUF7575
Zn_ribbon_9
Zn_ribbon_8
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
AMC00629
UniProt:
A0AAU8U2L7
LinkDB
All DBs
Position
644825..645679
Genome browser
AA seq
284 aa
AA seq
DB search
MPEMPEVETVRRGLEEIVIGKIVSSVTVTWPRIIQAEGGVEAFETRMPGQQLEKVGRVGK
FLLFYWTEVTWIAHLRMEGKYLYESTESPVDQYTHVICHLTDGHDLRYRDVRKFGRIHMV
EKADTEAEIAKLKLGPEPNDLTFDYLQKRFDKTTRSIKAVLLDQGVIAGIGNIYADEILF
AAKIHPEQSARSLYDEEIQAIITESRRIMASAIEVGGTTIRTYTNTFGENGQFADYLKAY
GKKGQPCPRCGTEIEKISVAKRGTHFCPYCQRIHLAVKYITSSI
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagatgccagaagtggagacggttagacgtggtctagaggagattgttattggt
aagatagtatcgtctgtgacggtgacttggccaagaattattcaagcagaaggtggcgtg
gaggcttttgagacccggatgccaggtcagcaattagaaaaggtaggtcgagtagggaag
tttttacttttctattggacagaagtgacatggattgcccatttacgaatggaaggcaag
tacctatatgagtcaacggaaagcccggtagaccaatatacccatgttatttgtcatctg
actgatggtcatgaccttcgttaccgagatgttcggaagtttggccggattcatatggtt
gaaaaggcagatactgaagcagagattgccaagctgaaattaggtcctgagccaaacgat
ttaacctttgattatctgcaaaagcgttttgataagacgacaagatccattaaggcagtg
ttgttagaccaaggggttattgcgggaattggcaatatttatgcggatgaaatcttattt
gcagcgaaaatccaccctgaacaaagcgccagatcactatacgacgaggaaatccaagcc
attatcactgagagtcgtaggattatggcgtcagctattgaagttggtgggacaacgatt
cgaacctataccaataccttcggtgagaatggtcaatttgccgattatttaaaggcctac
gggaaaaagggccaaccttgtccacgttgtggcactgagattgagaaaattagcgtggct
aaaagagggacgcatttctgtccatattgccaacgcattcaccttgcagtgaaatatatt
acatcatctatttaa
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