Aerococcus viridans: AWM76_03785
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Entry
AWM76_03785 CDS
T04270
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
avs
Aerococcus viridans
Pathway
avs03030
DNA replication
avs03430
Mismatch repair
avs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
avs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AWM76_03785
03430 Mismatch repair
AWM76_03785
03440 Homologous recombination
AWM76_03785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
avs03032
]
AWM76_03785
03400 DNA repair and recombination proteins [BR:
avs03400
]
AWM76_03785
Enzymes [BR:
avs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AWM76_03785
DNA replication proteins [BR:
avs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AWM76_03785
DNA repair and recombination proteins [BR:
avs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AWM76_03785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
tRNA_anti_2
HROB
CDC24_OB3
HHH_3
SMI1_KNR4
Motif
Other DBs
NCBI-ProteinID:
AMC00744
UniProt:
A0AAU8UFL6
LinkDB
All DBs
Position
781467..784955
Genome browser
AA seq
1162 aa
AA seq
DB search
MFVPLHVNSAYSLLTSPMSVEAYVQAGATAGYTHLGLADVNVMSGSLAFVRACEQNGITP
LIGLTVQFNIDNVKEELVVYAKNYEGYQHLMALSSSLKLQAEANRRAIYQEITMHADDYI
VIFSAMTGPHMRYLKQGDGQADYDQLEEELLWWRRHFSDDQLFLGLSALENEQFHAKAII
ELSEQSGVPLVAMPHIQYANPDDFFTQQVLEAIDNNKPMTGIDELKQVKGSHALRNPDQW
AKMYQDPDDQDSVYKDSLDRLEVAVKGIDIVFPQIETLLPKYPLPSEYTATPKYLKDLAE
AGLVKRVANITDAYTDRLAYELSVIHDMGFDDYFLIVWDVMNYAHQHHIQTGPGRGSAAG
ALVAYVLEITDVDPIANDLLFERFLNPDRQNMPDIDLDFPDNKRQEVLDYVYRKYGDNHV
AQIATFGTFGARQALRNVGSVFGKAQVTLSEWANTVGNNPNLPAETLTSVYDQSQKLREL
IENEDHGQLWFDTARKLEGLPRHVSTHAAGVVIADQPLTLHTPLQASSTHIPNTQYTMGD
VEAVGLLKVDFLSLSNLTILHDGLAAVGKLTSRPVKALDIPLDDPKTYEIFQHADTNGVF
QFESDGIKNVLKQVAPTSIEDVVAVNALYRPGPVQQIPHFVARKHGREAIAYPHPDLAPI
LAPTYGIMVYQEQVMQVTQKIAGFSLGEADILRRAIGKKKHETIENVRKQFISGAIENGY
QESVAVQIYDYIEAFANYGFNKSHSFAYSYLAYQLAWIKANYPVAFYYGNLKHTRIYDKK
GKNLVLEAKNHGVEVVNPDINKSFYGLSVVDDHQLQLGLGDIRGIPKRAVEEMIQAREAE
GPFKDFTDFIHRLGKLALKEDILVKLAQAGALDSFGYNRRTLQLEAIPKMITHEQLFKTD
NQRQTSLLGDDDLSAMFAPKIVEIDEFDQHQLIENEIETLGQALSISLFEDYEGFYQTGI
IDYIENLKENSKAFFLGEVIAVKRITTKKNQPMAFVTVKDQTGQISVTAFPEAYITFAKH
LNQGNALLVYGKTQKRNDELQVVLTKAWMLDEDTKVYLNNLSQKQADISGQADYAGGQKS
QLAQSIQAPVCWIRVEDKAKASALKAGLLEVVGKYPGQTRLHFTIVASQENYWLSEKYAI
KVTEESVTELVAVYGEGNVVVK
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtgccattacatgtaaattcagcctattccctattaaccagtcccatgtctgtt
gaggcatacgtacaggcaggggcgactgcaggttatacccatttaggcttggccgatgtt
aatgtcatgtcaggcagcttggcattcgtccgtgcctgtgagcaaaatggcatcacccct
ttaatcgggctaaccgtccagtttaatattgacaatgtcaaagaagaattggttgtttac
gcaaaaaactacgaaggctatcagcatctgatggccctttcgtcgtctttaaaattacaa
gcagaagccaaccgccgggccatttaccaagaaatcaccatgcacgcggatgattacatt
gtaattttttctgctatgaccgggccacatatgcggtacttgaaacaaggcgatggtcag
gcagactacgaccagttagaggaagagttactttggtggcgacgccatttttcagatgac
caattattcctaggtctttcagccttggagaatgaacaattccacgcaaaagccatcatc
gaattgagtgagcaatcaggggttccattagtcgctatgccgcacattcaatatgcaaat
ccggatgacttcttcacccaacaagtccttgaagccattgacaataataagccgatgaca
gggattgatgagttgaagcaagtgaaagggtcccatgcacttagaaatccagaccaatgg
gccaagatgtaccaagatccagatgatcaagattcagtttacaaagactccttggaccgg
ttagaggtagcagtgaaggggattgatattgtatttcctcaaattgaaaccttgctgccc
aaatacccgctaccgagtgaatacacggctacaccgaaatacctaaaagacttagcggaa
gcagggttagttaagcgtgtggcgaacattacagatgcctacaccgaccgcttggcttat
gaattgtcggtcatccatgatatgggctttgacgattattttttaatcgtttgggatgtg
atgaattatgcccaccaacaccatattcaaacgggtcctggacgtgggtcggctgccggg
gccttagtggcttacgtcttagaaattacagacgttgacccgattgcaaacgacttacta
ttcgagcggttcttgaatccggatcggcagaacatgccagacattgacctggatttcccg
gataataaacggcaagaagtgctcgactatgtctaccggaaatacggggacaaccatgta
gcacaaattgcgacctttgggacatttggtgctcggcaagccttgcgaaatgtcggttct
gtttttgggaaagcgcaagtgaccttatcagaatgggctaatacagtaggcaataatcct
aatttaccagctgaaacactaacatcagtctacgaccagtcacagaaattgcgggaatta
attgaaaacgaagaccacgggcaattgtggtttgataccgcccgtaaactagaaggttta
ccacgtcacgtttccacccatgcggccggtgtcgtgattgcggaccaacctttaaccttg
catacaccgcttcaagcctcatccacccatattccaaatacccaatatacaatgggggat
gtcgaagcagtgggcctactaaaggtcgactttctgagtctatccaatttaactattttg
catgacgggttagcggccgttggtaaattaaccagtagacctgtcaaagccttggatatt
ccattagatgatccaaagacttatgaaatcttccaacatgcagataccaatggcgtcttc
caatttgaatcggacggtattaagaatgttttgaaacaagtagcgcctacatccattgaa
gatgtggtggctgttaatgccttgtaccgaccaggtccagtccaacaaattccacatttt
gtggccagaaagcatggacgtgaagctattgcttacccacaccctgatttagcaccaatt
ttagcccctacatatgggattatggtctaccaagaacaggtaatgcaggtgacccaaaaa
atcgcaggatttagcctgggtgaagcggatatcttgcgtcgtgccatcggtaaaaagaaa
cacgaaaccattgaaaatgtccgcaaacaatttatcagcggggctattgaaaatggctac
caggaaagtgtcgctgtgcaaatttacgactatattgaagccttcgccaactatggtttt
aataagtcgcattcctttgcttactcatacttggcctaccagttggcttggatcaaggcc
aattatccagttgctttttattatggcaacctgaaacatacaaggatatatgataaaaag
gggaagaacctggtactcgaagcgaaaaaccacggggttgaagtggtcaatccagatatc
aacaagtcattttatggcttgtcagttgtggacgaccaccaattacaactcggcttaggg
gacattcgaggtattcctaagcgtgcagtagaagaaatgattcaagctcgggaagcggaa
ggaccatttaaggactttaccgactttatccaccgacttggaaagctcgccctcaaagaa
gacatcttagtcaaattagcccaagcaggtgcattggatagctttggctacaaccgacgt
accttacaattggaagctatccctaagatgattacccatgagcaactctttaaaacagac
aatcaacgccaaacctcgctacttggggatgatgacttgtcagccatgttcgcaccgaag
attgttgaaatcgatgaatttgaccaacaccaattaattgaaaatgaaatagaaacgctg
gggcaagcattatcgattagcctttttgaagactatgaaggtttttatcaaacagggatt
attgattacattgaaaacctcaaagaaaatagcaaagcctttttcctaggggaggttata
gcggtgaaacgaattaccactaagaaaaatcaacctatggcctttgtgacagtaaaggac
caaacggggcagatttctgtgacagccttcccggaagcttatatcactttcgccaaacat
ttaaaccaaggcaatgccttgttggtttacggaaagacgcaaaagcgcaatgatgaattg
caagtcgtcttgactaaggcttggatgttggatgaagatacaaaagtatatttaaacaat
ttgagtcaaaaacaagcagacatttctggccaagcagattatgctggcggacaaaaaagc
cagcttgcacaaagcatccaagccccagtttgttggattcgcgttgaagacaaggccaag
gctagtgcgctgaaagctggactactagaagttgttgggaaatatccgggtcaaaccagg
cttcatttcacaattgtggcgagtcaggaaaactactggttgtctgaaaaatatgccatt
aaagtgacggaggaatccgttacagaattggttgctgtctatggcgagggaaatgtggtt
gtaaaataa
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