Aerococcus viridans: AWM76_04575
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Entry
AWM76_04575 CDS
T04270
Name
(GenBank) ATP-dependent nuclease subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
avs
Aerococcus viridans
Brite
KEGG Orthology (KO) [BR:
avs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
avs03400
]
AWM76_04575
Enzymes [BR:
avs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AWM76_04575
DNA repair and recombination proteins [BR:
avs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
AWM76_04575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
DEAD
ResIII
AAA_30
AAA_12
Motif
Other DBs
NCBI-ProteinID:
AMC00869
UniProt:
A0AAU8U325
LinkDB
All DBs
Position
945927..949790
Genome browser
AA seq
1287 aa
AA seq
DB search
MKNRQKQTTIPLQTEANARYTADQWAAIHLEGDNLLVSASAGSGKTSVLVQRILQKVRRG
YGVDELLVVTFTEKAASEMKERLEVALQEMINEESDADSRQHYLQQIAKLPQANISTIDA
FCKQVIQRYYFLIDLDPVYRLLTDETENMMHFENVWESLKEDLLAEGNPEYLRMANYFAS
DRKDDKIDRLIFDLYNKSRVHTHPNDWLDGLVAKYPDADTPYGESAFYQEYVVPTLIDEI
ESLENTIRLYIEDLPVAEAVGFEKMATSMKEKLAYLDQLKTNVRASYKDAYQQIIATSFP
ALVSMSKKDFEDGNDAQIDLRTQLGKRHNKTIKDVFDKDIMPYFTFDEQYQGLFIQEAKK
LGQAIINVEKVFTERMTAHKFDQRILDFSDIELFTYQILSKQLADTEAGDGESMSGNVNT
MNEAKAYYRDKFTEVMVDEYQDVNALQEAILQAVSGNPEHPNMFMVGDVKQSIYRFRFAE
PGLFIHKFNQFADGNGGQRIVLAENFRSRADVLDFTNFIFRQVMDPQVGQIAYDEDAALK
LGFTAYPETDRMQTEILLYEEEDGGKSSDYDQEGLDGLEGDVSNGTKMQAELIAQSILDK
VNNQHMIYDKRLQVNRPITFNDIVILVATRRHHSELEDVFAQYKIPLMLDDSANYFQRTE
IRVMLNVLKFINNPYQDIPLAAILRSPIIGLNEQDLAKIRIANKQATYYDAMKTYMAMDE
GQDERVAEKLRTLNDWHLAWRDIARDKPLATLIWQIYTDTGFLDYVGGMPNGEIRQNNLH
GFYKLASDYEASAFKGIFQFIRFVEKIQEKDNDLQAPKHGDEARSAVHVYTIHHSKGLEF
PLVYVYNISKRFNTQDLRNPVIYNDAIGIGVKLSDRTRHITYPNMFEMMAKRFEKKDMLA
EEMRKLYVALTRAEQQLVLVGMVKNFDTTIGKWKGLLMKDEQLSPSGRIKANNLLDWIGP
ALMRHHDFDKVNHSVHIPDYLANTKTNFRVAVVSSEDALAGRNKWVQKVDESNQVDQAEL
LAAIFSDDKMATDDQDNKQVIQLPDADFDYAYQSATKTTSFQSVSELKRMLQDPSDQDLQ
PWSVNNQNKLTKTFRYIEEDYDQPSFLAREQAVTPTAIGSAAHLLMQKVNLRAKPSEATF
KALFDDLCQVGILSQQLWPHIQVDKLVAFFDTAVGQLILKQVDHVYREETFSLMVAGSEI
FTDMATDDDLLVHGTIDGFILFQDEIFLYDFKTDRIAYLNESQQEQTLIDRYQGQMALYA
QALETIWGRPVTQKMIISLDVSKTFFI
NT seq
3864 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatagacaaaagcaaaccactattccattgcaaacagaagctaatgcccgttat
acagccgaccaatgggcagcgatacatttagaaggggataacctgctcgtttcagcctct
gctggttctggtaaaacgagtgtccttgtccaacgcattttgcagaaggtacgacgcggc
tatggggtggatgagttattggttgtaacgtttaccgaaaaagcggctagtgaaatgaaa
gagcggttggaagtagccttacaagaaatgatcaatgaagaatctgacgctgacagccgt
cagcactacctgcaacaaatcgccaaattgccacaagccaatatttcaaccattgatgcc
ttttgtaagcaagtcatccaacgttattatttcctaattgatttagacccagtttaccga
ttgttaaccgatgaaactgaaaatatgatgcattttgaaaatgtttgggagtccttgaaa
gaggacttattagcagaaggcaatccagaatatttacgtatggcaaattactttgcttcc
gaccgtaaagatgacaagattgaccggttgatttttgacctatacaacaagtctcgggtc
catacccatccaaacgactggttagatgggttagtagctaaatatccggatgcggatacc
ccctacggtgagtctgctttttatcaagaatatgtggtccctactttaatagatgaaatt
gaatctcttgaaaatactattcgtttgtatatcgaagacctgccggttgctgaagcggtt
ggttttgaaaaaatggccacttctatgaaagaaaagttagcttacttagaccaattgaag
acgaatgtgagggcctcttataaggatgcttaccaacaaattattgcaacatctttccca
gctttagtttcaatgagtaagaaggactttgaagatggtaacgacgcgcaaattgattta
cgaactcagttaggaaaacgacacaataaaacaattaaggacgtattcgacaaggatatc
atgccttactttacttttgacgagcaatatcaaggcctctttattcaagaggctaaaaaa
cttgggcaagctattataaatgtggagaaggtctttactgaacgaatgacagcccataaa
tttgaccaaagaatcttagatttctcagatattgaacttttcacctatcaaattttaagt
aagcagttagcggacacagaagctggcgacggcgaaagtatgagtggaaacgtcaatact
atgaatgaggctaaggcttactatcgggataagttcactgaagtcatggtggatgagtat
caggatgtcaacgccttacaggaagccattctacaagctgtatcagggaatccggaacat
ccaaatatgttcatggtgggggatgtgaagcagtcgatttaccgtttccgctttgctgaa
ccaggtttatttatccataaattcaaccaattcgcggatggtaatggagggcaaaggatt
gtcttagcggaaaacttccggtcaagagcagatgtccttgattttaccaactttatcttc
cgccaagtcatggatccacaagtggggcagattgcttatgatgaggatgcagcccttaaa
ttgggctttaccgcctatccagaaaccgaccgaatgcagactgaaatcctcctttacgaa
gaggaagatggcggtaaatctagcgattacgaccaggaaggtttagatggtctagaaggc
gacgtctcaaatgggacgaaaatgcaagcagaattgattgcccaatccattttggacaag
gttaacaaccagcacatgatttatgataaaaggctacaggtgaatagacccatcaccttt
aatgacatagtaattcttgtagcaactagacgtcaccattcggaattagaggatgttttt
gctcaatataaaattcctttgatgttggatgattcggcgaactatttccagcgtacagaa
atccgtgtcatgttgaatgtcttaaaatttatcaataatccttaccaagatatcccactg
gcggctattttgcggtcaccaattattggcttaaatgaacaagacctagcgaaaatccgg
attgccaacaaacaggccacctactatgacgccatgaaaacttatatggcaatggatgaa
gggcaagatgaaagagtagctgaaaaattgcggactttgaatgattggcacttagcgtgg
cgagacatcgcccgcgacaaaccgttggcgactttaatctggcaaatttatacagatacg
ggcttcctcgattatgttggtgggatgccaaatggggagatccggcaaaataacttacat
gggttttataaattggcgtctgactatgaagcgtcagcctttaaggggattttccaattt
atccgctttgttgagaaaattcaagagaaagacaacgacctgcaagcacccaaacacggg
gacgaagcgcgatctgcggtccatgtctatactattcatcattcaaaaggtttagagttt
ccgctcgtttacgtgtataacatttctaagcgttttaacactcaagatctaaggaatccg
gtgatttataatgacgctatcggtatcggggtgaaattgtctgatagaacacgccacatc
acttatccaaatatgtttgaaatgatggctaaacgctttgaaaagaaagacatgttggct
gaagaaatgcggaaattatacgtggccttaactcgagcggaacagcaattggtattagtg
ggtatggtaaaaaacttcgataccacgattggcaagtggaaagggcttttgatgaaagac
gagcaactatcgccctcaggccggattaaagccaacaatctacttgattggattggccca
gcgctgatgcgccaccacgattttgacaaggtcaaccattcagtccatattccagactat
ctagccaacaccaagactaatttccgggttgcagtcgtttctagcgaagatgcacttgcg
ggtcgcaataagtgggtacagaaagtcgatgaatccaaccaagttgaccaagcagaactt
ttagcggccattttttcagatgacaaaatggctaccgatgatcaagataataaacaagtc
attcagctaccagatgccgacttcgattatgcttatcaatcggcgaccaagacaacatcc
ttccaatcagtatcagaattgaaacggatgcttcaagatccaagtgaccaggacttgcaa
ccttggtcagttaacaatcaaaataaattgactaagaccttccgttatatagaagaagac
tatgaccaaccgagtttcttggccagagaacaagctgtcacaccaacagctattgggtca
gcggcccatttgttaatgcagaaggtgaacttaagggctaaaccaagtgaagcgaccttt
aaagccctctttgatgacctatgccaagtaggcattttaagccaacaactttggccccat
attcaagtggataaactagtagccttcttcgatacggcagtggggcaattgattttgaaa
caagttgaccacgtatatagagaagaaacattctctctgatggttgctggatcagaaatc
tttacggatatggcaacagatgatgacttattggtccacgggacaattgacggttttatt
ttatttcaggacgaaatcttcctgtatgactttaaaactgaccggattgcttatctaaat
gaaagccagcaagaacaaaccttgattgaccgttaccaaggtcaaatggctctatatgcc
caggcacttgaaaccatttggggacggccggttacacagaaaatgattatatctttagac
gtatcaaaaactttttttatctaa
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