Aerococcus viridans: AWM76_05240
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Entry
AWM76_05240 CDS
T04270
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
avs
Aerococcus viridans
Pathway
avs03410
Base excision repair
avs03430
Mismatch repair
avs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
avs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AWM76_05240
03430 Mismatch repair
AWM76_05240
03440 Homologous recombination
AWM76_05240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
avs03400
]
AWM76_05240
DNA repair and recombination proteins [BR:
avs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
AWM76_05240
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AWM76_05240
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AWM76_05240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
ssDNA-exonuc_C
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AMC00991
LinkDB
All DBs
Position
1083644..1085989
Genome browser
AA seq
781 aa
AA seq
DB search
MLQSVYEWIEPEYLSNADDTAATFIQQLAEDLSLPKMVVQVIYDKGYQTAEAIQAFIAKE
PVFYDPFLLKDMEKAVSRLHQAVEDYEEILIYGDYDADGITSTTILYETLEMLGANVSFY
LPNRFDDGYGPNKDVYAYYIKKGTQLILTCDNGVAGHEAVAYAKDQGVDVIITDHHEIGD
SLPDAYAIVHPRHPEGQYPFGDLAGAGVALKLATALLGETPSDLLDVAAIGTVADLVSLT
DENRVIVASGLDQMKHTERLGLQMFFEKESIQPDQIDEQTIGFILGPRLNALGRLGDPNP
GVQFLTSFDDQEVGELVELLDSENNARKAIVDKMVTEAEAIVDGEGQLPQMIILGQEGWH
EGVLGIVASRLVEKYHRPTILLSKKPENGSYKGSGRSIEGIDLFQVLQAGKDYADKFGGH
EMAAGMTVAIDQFEAWKSALLDRVAEFEAVYTQQTPLKIDGIIGITDITLENIKALDPIK
PFGTDNRQPLFLIKDVQLSQIQLIGKDKNTLKLTVADADVKTSMIAFKSGALAKQLVANE
PIDVVVTLSINAWNGNQSPQAQIKDIRQSSKSIFDLRNMRERNQIMSIENATYIFENAPF
FKAYKDEIPFTSEAIMTSEIGQILEKGSARASKESLVIFDIPKDLSAVKDLVNQAAIDNI
YVYAYSAVNAYMVGKPTRQEFGQLYKYLQGHGTVPLAGKEQALADFFKISKVKLDLMVKV
LEEAELVKWHNTDLVTLPVNEKVDLLATQTMADWETQINNERLLRYNDVKMIKDYFYSGG
K
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
ttgttgcaatcagtttatgaatggatagaacctgaatacttaagcaatgcagatgataca
gctgcaacctttatccagcagctagctgaagacctatccttaccaaagatggtcgtacag
gtcatttatgataagggctaccaaacagctgaagcgattcaagcttttatcgctaaagag
cccgtattttatgatccattcttattaaaagatatggaaaaggccgtttcaagactacat
caagcggttgaagactatgaagagattttaatctacggggattatgatgcagatggaatc
acttctacgacgattttgtatgaaacgctagaaatgcttggggccaatgtatccttctac
ttacctaaccggtttgatgatgggtatgggccaaacaaggatgtctatgcttattacatc
aagaaagggacccaactaatcctgacttgtgacaatggggtagcaggacacgaagccgta
gcttacgccaaagaccaaggtgttgacgtgatcatcacggaccaccatgaaatcggggac
agcttgccggatgcctatgccatcgttcatccaagacatccagagggtcaatatcctttt
ggtgatttagcaggtgcaggtgtcgcattgaaattggccacagccttacttggtgaaacg
ccaagtgatttactggatgttgctgctattggaaccgttgctgacttggtgtcactaact
gacgaaaaccgggtcattgtggcgtctggattagaccaaatgaagcataccgagcggtta
ggcttacagatgttctttgaaaaagagagcattcagccagaccaaatcgatgagcaaacg
attggttttattctcggaccaagattaaatgccttaggtcgtttgggcgatccaaaccct
ggtgtgcagttcttaacctcttttgatgaccaagaagttggcgaacttgttgagttacta
gactcagaaaataacgcccgtaaagccatcgttgataagatggtgacagaagcggaagcc
atagttgacggtgaaggtcaattaccgcaaatgattatcttgggccaagagggttggcat
gaaggggtgctaggaatagtagccagtcgtttggttgaaaaatatcaccgaccaaccatt
ctactaagcaagaaacctgaaaatggcagctataaagggtctggccgttcaatagaaggg
attgaccttttccaagtattacaagccggtaaagactatgcggacaaatttggtggtcat
gaaatggccgctgggatgaccgtagctattgaccagtttgaagcttggaagtcggcttta
cttgaccgagtggcagaatttgaagcggtatatactcagcaaacaccgctgaaaattgat
gggatcattgggattacagacatcacccttgaaaatatcaaagcccttgacccaattaaa
ccctttggtaccgataaccgacaacccttgtttttaataaaggacgtccaattatcacaa
atccaattgattgggaaggacaagaatactttgaaactgacagtagcagatgcagatgtc
aaaacaagtatgattgcttttaaatctggcgccttagccaaacaattagtagcgaacgag
ccaatcgatgtggtagtcaccttgtccatcaacgcatggaacgggaaccaatcaccgcaa
gctcaaatcaaggatattcgccagtctagtaaaagtatttttgacttgcgaaatatgcgc
gagcgcaatcaaatcatgtcgattgaaaatgccacttatatctttgaaaatgcgccgttt
ttcaaggcttataaagacgaaattccttttacaagtgaggccatcatgaccagtgagatt
ggtcaaatacttgaaaaaggatcggcacgtgctagtaaggaaagcttggtcattttcgat
attccaaaggacttatcagctgttaaagacttggtaaaccaagcggcaattgataatatt
tatgtttatgcttattctgcagttaatgcatacatggttggaaaaccaacccggcaagag
ttcggccaattatataaatacttacaaggccacggaacagttccactcgcgggtaaggaa
caggcgctggcggacttcttcaagatttctaaggtgaaacttgatttaatggtgaaagtc
ctagaagaagcggaattggttaaatggcataatacggatttagtgactttaccggtaaat
gagaaggtagacttattggcaactcaaaccatggccgattgggagacccaaatcaataat
gaacgacttttacggtataatgatgttaaaatgattaaagattatttctattcaggagga
aaataa
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