Aerococcus viridans: AWM76_05685
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Entry
AWM76_05685 CDS
T04270
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
avs
Aerococcus viridans
Brite
KEGG Orthology (KO) [BR:
avs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
avs03016
]
AWM76_05685 (truB)
Enzymes [BR:
avs01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AWM76_05685 (truB)
Transfer RNA biogenesis [BR:
avs03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AWM76_05685 (truB)
Prokaryotic type
AWM76_05685 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AMC01067
UniProt:
A0AAU8U3N2
LinkDB
All DBs
Position
complement(1180542..1181453)
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AA seq
303 aa
AA seq
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MDGILPLWKERGMTSHDCVFKVRKILKMKKVGHTGTLDPNVDGVLPICLGKGTKLVELLM
DKTKVYTGEITLGFATTTEDLDGEVIAEESLANPFKDDQIQALMHELTGHIIQIPPMYSA
IKVKGKRLYEYAREGLEVERPEHPVFVHDFKLVGPSRFEDGKQVFAFEVVCGKGTYVRTL
ASDLGRKLGVPATMTSLTRDGSTPFSREDCLTLSQLAEAVEAEDYTWLVPVESALTAYPV
WQVPAEDSHLVKLVENGSVLELATLPADLRGQLPVTAYIDSKLKALYDVHPNKDGKIKPS
KMF
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggatggcattttgcctttatggaaagaacgtggcatgacgagtcacgactgtgtattt
aaagtaagaaagattttaaaaatgaagaaagttggccatacagggactttagaccctaat
gttgatggggttttaccgatttgtttaggtaaggggaccaaattggttgaattgttgatg
gacaaaaccaaagtttatactggcgaaattacactaggatttgcaacgacaactgaagat
ttagacggtgaagtgattgctgaagaatctttagccaatccttttaaagatgaccagatt
caagcattgatgcatgaattaacaggtcatatcatccaaataccgcccatgtattcggcg
attaaagtcaaagggaaacgcctgtatgagtatgcccgtgaaggccttgaggttgaacga
cctgaacacccggtatttgtccacgacttcaagttagtgggtccatctcgttttgaggac
ggcaagcaagtttttgcttttgaggtggtttgtggcaaagggacctatgtccgcacttta
gccagcgacttagggcgaaaactaggggtaccagcgacgatgactagcctaactcgggac
ggatcaacccctttttcaagggaagattgtctgaccctatcacaattagcagaggcagtt
gaagctgaggattatacttggttggtgccagttgaatcggccttaacagcctatccagtt
tggcaggttccggctgaggacagccacttagtgaaattggtggaaaatgggtcagtccta
gaattagcgacgttaccggctgatttaagaggtcaattaccggtgacggcttatatcgac
agcaagttaaaggcgctttatgatgtccatccaaataaagatggtaaaataaaaccaagt
aaaatgttttaa
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