Aerococcus viridans: AWM76_09345
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Entry
AWM76_09345 CDS
T04270
Name
(GenBank) exonuclease sbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
avs
Aerococcus viridans
Brite
KEGG Orthology (KO) [BR:
avs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
avs03400
]
AWM76_09345
DNA repair and recombination proteins [BR:
avs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AWM76_09345
Archaeal homologous recombinant proteins
AWM76_09345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
nSTAND3
KASH_CCD
AAA_21
DUF6437
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AMC01735
LinkDB
All DBs
Position
complement(1986900..1990085)
Genome browser
AA seq
1061 aa
AA seq
DB search
MRPIKLELQAFGPYKEKTSLDFTDLGDQNLFLISGSTGAGKTTIFDAIVYALYGKTSGSS
RDINELKSQLAEDESVAYVRLTFMIHGKTYTVERIPKQKRPTKKGLIREQNAEVTLEGED
FSLSKTQEVDSKLVEVLGLSANQFRQIVMLPQGEFKKLLEASSGEKEGILRTIFHTDYLD
RFQQAIAERFKQANQEVGTLKKQVDQHSQSFVTFADNKTEQAKEQDGNQSENQTGVSENA
LTEKDRVQNWVDQEDYQALSEWAGQKSIEMNQETAQLSQEITAAEAKIQKLEGYIQLLTK
QDELVQQEASIKEREAAIVGKRQALNQYQTTQDAYRLIQQIQKLTDRQEQLQVLMNEKTN
LLQEADGRLQAVKAEQADWQDRIDLVDSLRAELQDLAIQENKWDNYLMQEGRLIKQVAHG
QSLTEQAKKLTSQIQDQEKVIEAGEISLKKLQAELDKVGDISQQQASMDNKSYQYNLLVK
SYQDMVKTNQEIADLSAQVEADQKDYQAKVDERNRLELAYSQNLAGELASQLVEGQPCLV
CGSIHHPAPAVQQEGAVTKEMVEAGVDATQAAFQLYSSKAERLSAIQETFDRMASDQNIK
GLAAEATSNEEKLAIWQTQLDKEAADIQQGKAHLDKLSQTKQDLDKQFNEMSKQVDDAKK
ALNNKHVEASTLKGQSESNQSTVEELRTEIDQLKGQLVGDSKAVVTAEYQAKHKTLAEIT
AKDQALKSQLDKYQQEVAKLTTQITGYNDQIEQGQVELKADQTALDEAMADRQESQEDIC
QIHQSQKNWAAIESEIQRFDNEVYAFKENKTANQNQIAAAGLDKKADTYQMDIEQERLKL
NKLKDAKDQVISIKAQLDHAIYLFKDSFASYQEKGRHFGELSLLNKVANGKEKAYGYISF
ERYILGLYFDEILQYANERLMAMTQMRYEFRRIVEGQSGAGAKGLDLAVFDYQAGGKRSV
QSLSGGEGFKASLALALGLSDVIQNDAGGIEIGTLFIDEGFGTLDQESLQQAIETLTDLQ
QASGRIVGIISHVAELKQQIPVHLQVSASNDGSKAFFTGVQ
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
gtgagacctattaaacttgaattgcaggcttttggaccttataaagaaaaaacgagccta
gactttacagacttaggcgatcagaacttattcttgatttcaggatccactggtgctggt
aaaacgaccatttttgatgccattgtttacgccttatacggaaagacttctggttcatcg
cgtgatattaatgaattgaagtcgcagttagctgaagatgaaagtgttgcttatgtacgg
ttaacctttatgattcacgggaaaacctatacggtggaacggattcccaagcaaaaacgg
ccgactaaaaagggcttaattcgagagcagaatgcggaagtaaccttagaaggggaagat
ttttcactaagtaaaacgcaagaagtggatagtaagttagttgaagttcttggtttgtca
gcaaatcaatttagacaaattgtcatgttgccacaaggagagtttaaaaaactcttggaa
gctagctcgggcgaaaaggaaggcattttacggaccatattccacactgattatttagac
cggttccaacaagccatagccgaacggtttaaacaggccaaccaagaagtgggcaccttg
aagaaacaagtagaccaacatagccaatcattcgtgacctttgcagataataagaccgag
caagcgaaagaacaagatggtaatcaaagtgaaaatcaaaccggggtttctgaaaatgcc
ctaacagaaaaagaccgcgttcaaaattgggtggaccaagaagactatcaggcgctgtct
gaatgggcagggcaaaaatctattgaaatgaatcaagagactgcacaattaagccaagaa
atcacagcagcagaagctaagattcaaaagctagaaggttacattcaattgctcaccaaa
caagatgagttggttcaacaagaagcttctattaaagaacgagaggcagcaattgttggt
aaacgtcaggcgttaaaccaatatcagaccactcaagacgcataccgattaatccaacaa
attcaaaagttgacggatagacaagagcaattacaggtcttgatgaatgagaaaacgaac
ctattacaagaagcagatggtcgtttacaagccgtcaaagctgaacaagctgactggcaa
gaccggattgacctagtagatagtctacgggcagaattgcaagatttggctatccaagaa
aataaatgggataactatttaatgcaagaaggtagactcataaagcaagtggctcatggc
caaagtttgactgaacaggcaaaaaaattaaccagtcagattcaagaccaggaaaaagtg
atagaagctggggaaatatcactgaaaaaactacaagcagaattagacaaagtaggggat
attagccagcaacaagcctcaatggataataaaagctatcaatataacttgttagtgaaa
agctatcaagacatggttaaaaccaaccaagagattgcagacctctctgctcaagttgaa
gcggaccaaaaagactatcaagcaaaagtagacgagcgaaaccgtctggaattggcttat
agccaaaacttagcgggcgaattagctagtcaattggttgaaggacaaccttgtttggtc
tgtggttctattcatcatccagcgcccgcagtgcaacaagagggtgcagtgaccaaagaa
atggtcgaggcaggggtggacgctactcaagcagctttccaattatattcaagtaaagca
gagcgcttatctgcgattcaggagacttttgaccgaatggcttctgaccaaaatattaaa
ggattagcggcagaggcgacaagtaatgaagaaaaacttgctatatggcagacccaactt
gataaagaagcagcagatattcaacaaggcaaagcacatttagacaagttaagccaaacc
aaacaagacttggacaagcaatttaatgagatgagtaagcaagtggacgatgccaagaaa
gctttaaataataagcatgtcgaggcgtctacccttaaaggacaatcagaatctaatcaa
agtacggtagaagagttacgcactgaaattgaccaattaaaagggcaattggtgggggat
tctaaagctgttgtcacagctgaataccaagcgaaacacaagaccttagcagaaattaca
gctaaagaccaagcgttgaagtctcaattagataagtaccagcaagaagttgccaagcta
accacacagattacaggatataatgatcaaatcgagcaaggtcaagtagaattaaaagct
gatcaaactgctttggatgaggcgatggccgaccgtcaagaaagtcaggaagacatctgt
caaatccatcaaagtcaaaagaattgggcagctattgaaagtgaaattcaacgttttgat
aatgaggtttatgcctttaaagaaaataagacagcaaaccaaaatcaaattgcagcagct
ggtttggataaaaaagcggatacttatcagatggatattgagcaagaacgccttaaatta
aataaattgaaagacgcaaaagatcaggtgatttcaatcaaagcccaattagaccatgct
atttacctatttaaggatagtttcgcatcctaccaagaaaaagggcgtcatttcggggaa
ctatcgctcctaaataaggtagccaatgggaaagagaaggcttatggctatatttctttt
gagcgctatattttaggtttgtattttgatgaaattctccaatatgctaatgaacgtttg
atggccatgactcaaatgcggtatgaatttagacggattgtcgaagggcagtctggtgca
ggggctaaaggacttgacctagctgtctttgactaccaagctggtgggaagcggtcggtc
caatccctatctggtggagaaggctttaaagcttccttagccttggcccttggtctgtct
gacgtgattcaaaatgatgccggtggtattgaaattggcacgctctttattgacgaaggt
tttggtaccttagaccaagaatccttgcaacaagcgattgaaaccttgactgatttgcaa
caagcgagcggccgtattgttgggattatttctcacgtggctgaattgaaacaacaaatt
ccagtccacttacaagtgtctgctagcaatgacggttccaaagccttttttacaggggtt
caatag
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