Avibacterium volantium: NCTC3438_00058
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Entry
NCTC3438_00058 CDS
T06626
Symbol
clpB
Name
(GenBank) Heat shock protein F84.1
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
avt
Avibacterium volantium
Brite
KEGG Orthology (KO) [BR:
avt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
avt03110
]
NCTC3438_00058 (clpB)
Chaperones and folding catalysts [BR:
avt03110
]
Heat shock proteins
HSP100
NCTC3438_00058 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
Clp_N
AAA
AAA_5
AAA_16
AAA_22
Sigma54_activat
AAA_14
nSTAND3
AAA_7
bpMoxR
AAA_24
TniB
ATPase_2
NBD_SMAX1
DUF815
IstB_IS21
NACHT
AAA_25
T2SSE
AAA_19
DNA_pol3_delta2
Torsin
CLP1_P
SAM_Exu
Motif
Other DBs
NCBI-ProteinID:
VEB21721
UniProt:
A0A3S4IAP4
LinkDB
All DBs
Position
1:complement(54357..56930)
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AA seq
857 aa
AA seq
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MNIEKFTTRFQQALSEAQSLALGKDNQFIEPVHLMAALLNQEGSSVAPILTASGVNVAML
RNELNAELNRLPQVSGNGGDVQISRNLVNLLNLCDKLAQQKQDKYISSELFLLAALEEKG
SLSEILRKCGAKKENLQQAIEQIRGGQSVNDQNAEESRQALEKYTIDLTARAESGKLDPV
IGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSL
DMGALIAGAKYRGEFEERLKAVLNEIAKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLK
PSLARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVDEPSVEDTIAILRGLKERYEIH
HHVQITDPAIVAAATLSHRYISDRQLPDKAIDLIDEAASSIRMEIDSKPEPLDRLDRRII
QLKLEQQALQKEDDNASRKRLEMLEKELAEKEREYAELEEVWKSEKAALSGTQHIKAELE
NARTQMEQARRVGDLNKMSELQYGRIPELEKQLAQAESAEGKEMHLLRYRVTDEEIAEVL
SRATGIPVSRMMEGEKEKLLRMEKELHKRVVGQNEAVEAVANAIRRSRAGLSDPNRPIGS
FLFLGPTGVGKTELCKTLANFLFDDENAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGG
YLTEAVRRRPYSVVLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL
GSDLIQGNRDLGYEGMKEVVMSVVSQHFRPEFINRIDETVVFHPLDKENIRTIAKIQLKR
LEKRMESHGYHLAFTDAALDFIGEIGYDPIYGARPLKRAIQQEVENPLAQQILSGELIPG
KTITLDYVDGKITASQS
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgaatatagaaaaatttaccacaagatttcaacaagctttaagcgaagcgcagtcttta
gctttaggcaaagataaccagtttatcgaacccgtgcatttaatggcggccttgttaaat
caagagggcagttccgttgcaccgattttaactgcaagtggcgtgaatgttgcgatgtta
cgtaacgagcttaatgctgaactcaaccgcttaccgcaggtttctggtaacggtggtgat
gtgcagatttcacgcaacttggtgaatttattaaatttatgcgacaagctcgcacagcaa
aagcaagataaatatatttcatcagaactctttttattagccgcgttagaagaaaaaggc
agcttaagcgaaatattacgcaagtgcggtgcaaaaaaagagaatttacaacaagcgatt
gaacaaattagaggaggtcagtcagtgaacgaccaaaacgcagaagaaagccgtcaggca
ttagaaaaatatactattgatttaaccgcgcgtgcggaaagtggcaaattagatccagtg
attggacgtgatgaagaaattcgccgtacaatccaagtgttacaacgccgtacgaaaaat
aaccctgtattaattggtgaacctggtgttggtaaaaccgcgattgttgaaggccttgca
caacgtattgtaaatggtgaagtgccagagggattaaaaaataaacgtgtactttccctt
gatatgggcgcattaattgcgggggcaaaatatcgtggtgagtttgaagagcgcttaaaa
gccgtgcttaatgaaatcgctaaagaagaaggccgtgtgattttattcattgatgaaatt
catacaatggttggtgctggtaaaactgacggtgcaatggacgcaggtaacttattaaaa
ccttcccttgcacgtggtgaattgcactgtgtgggggcgacaacccttgatgaataccgt
caatatattgaaaaagatgccgcacttgaacgccgtttccaaaaagtttttgtggacgaa
ccaagtgttgaagacaccattgctatcttgcgtggtttgaaagaacgttatgaaattcac
catcacgttcaaattacagacccggcaatcgttgcggcggcgacactttcgcatcgttat
atttcagatcgtcaattaccagacaaagccattgatttaattgacgaagcggcatcgagt
atccgtatggaaattgactcaaaaccagagccgttagatagacttgatcgccgtattatc
caattaaaattggaacaacaagcgttacaaaaagaagacgataacgcgagccgcaaacgc
ttagaaatgcttgaaaaagaattagctgaaaaagagcgtgaatatgcggaattagaagaa
gtgtggaaaagcgaaaaagcagcgctttctggcacacagcatattaaagcagaattagaa
aatgcacgaacccaaatggaacaagcgcgccgcgtgggcgatttaaacaaaatgtctgaa
ttgcaatacggacgcattccagagcttgaaaaacaacttgctcaagcagaaagtgcagag
ggcaaagaaatgcacttgttacgctatcgtgtaaccgatgaagaaattgcagaagtgctt
tcacgtgccactggtatcccagtttctcgtatgatggaaggggaaaaagaaaaattattg
cgtatggaaaaagaattacacaaacgcgtggttggacaaaatgaagcggtggaagcagta
gcgaacgccattcgccgtagccgtgcaggattgtctgatccaaaccgtccgattggttca
ttcttattcttagggccaacaggggtaggtaaaacagaattgtgtaaaactcttgccaac
ttcttgtttgatgatgaaaacgcaatggtacgcattgatatgtccgagtttatggaaaaa
cacagcgtatctcgcttagtgggcgcaccaccgggatatgtgggctatgaagaaggtggt
tacttaaccgaagccgttcgccgccgtccatattctgtggtgttattggacgaagtagaa
aaagcgcacccagatgtgttcaacatcttattacaagtgcttgatgacggacgtttaact
gatggtcaaggtcgcaccgtagatttccgcaataccgtggtgattatgacctcaaactta
ggttcagacttaatccaaggcaaccgtgatcttggctatgaaggaatgaaagaagtggta
atgtcggtggttagccaacacttccgccctgagtttattaaccgtattgatgaaacagtg
gtattccacccattggataaagaaaacattcgcaccatcgcgaaaatccaattaaaacgt
ttagaaaaacgtatggaatcacacggctatcacttagccttcacagatgcggcattagac
ttcatcggcgaaattggttatgacccaatttacggcgcaagaccgcttaaacgtgcgatt
caacaagaagtggaaaacccactcgcacaacaaattctctcaggggaattaatcccaggg
aaaactattacccttgattacgttgatggtaaaatcacagcaagtcaatcgtaa
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