Avibacterium volantium: NCTC3438_00127
Help
Entry
NCTC3438_00127 CDS
T06626
Symbol
trmA
Name
(GenBank) tRNA (uracil(54)-C(5))-methyltransferase
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
avt
Avibacterium volantium
Brite
KEGG Orthology (KO) [BR:
avt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
avt03016
]
NCTC3438_00127 (trmA)
Enzymes [BR:
avt01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
NCTC3438_00127 (trmA)
Transfer RNA biogenesis [BR:
avt03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
NCTC3438_00127 (trmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_4
Methyltransf_31
MTS
Methyltransf_15
PrmA
Methyltransf_11
Cons_hypoth95
Methyltransf_12
TRM5-TYW2_MTfase
Phage_T4_Gp30_7
DUF3164
Methyltransf_23
AMP_N
Motif
Other DBs
NCBI-ProteinID:
VEB21854
UniProt:
A0A447SN56
LinkDB
All DBs
Position
1:121331..122425
Genome browser
AA seq
364 aa
AA seq
DB search
MQALPIEKYDELLAEKRQKLTALLAPFNAPELAVFDSPKQHYRMRAEFRVWHQDDDFYHI
MFDRQTRKPYRIDHFPIASQLINEMMQALLPLLKQQTILKHRLFQIDYLSTLSNKIIVSL
LYHKVLDEQWQQAAVALRQTLQQQGFDVQIIGRASKQKICLDQDYVDEILPVNGKEYIYR
QVENSFTQPNAVVNGKMLQWAIDCTQNSQGDLLELYCGNGNFSIALAQNFRNVLATEIAK
PSVAAAQFNIAANHIDNLQIIRMSAEEFTQAMNGMRAFNRLKGIDLQAYDCNTIFVDPPR
AGLDPDTVKLVQQYDRILYISCNPYTLCDNLQTLCQTHRIERAALFDQFPYTEHMESGVW
LIRK
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgcaagccttacctatcgaaaaatatgatgaattattggcagaaaaacgccaaaaatta
accgcacttttagcgccctttaatgcgccagaattggcggtatttgattcgccaaaacaa
cattatcgtatgcgtgctgaatttcgtgtttggcatcaagatgatgatttttatcatatt
atgtttgaccgtcaaacgcgtaagccttatcgcattgatcattttccgattgccagccag
cttatcaatgaaatgatgcaagcgcttttgccgttgctcaaacagcaaaccattctcaag
catcgtttattccaaattgattatctcagcaccctgagcaataaaattatcgtcagcctg
ctttatcacaaagtgcttgatgaacaatggcaacaggcggcggtagcattacgccaaacc
ctgcaacaacaaggttttgacgtgcagatcatcgggcgtgcctctaaacaaaaaatttgt
ttagatcaagattatgtggacgaaattctgcccgtaaacggcaaagaatatatttatcgc
caagtggaaaacagtttcacgcaacccaatgcggtggtaaatggcaaaatgttgcaatgg
gcgattgattgcacccaaaacagccaaggggatttgctcgagctttattgcggcaacggc
aatttttctatcgcgctggcacagaactttcgtaacgtgctggcaacagaaatcgccaag
ccatcggttgctgccgcgcaatttaatatcgccgcgaaccatattgataatttgcagatt
atcagaatgtcggcagaagaatttacccaagcaatgaacggcatgcgcgcctttaatcgt
ttaaaaggcattgatttgcaagcttatgattgcaataccatttttgttgatccgccaagg
gcagggcttgatcctgacacggtaaaattggtgcaacaatatgatcgcattttgtatatt
tcctgcaatccgtacactctatgcgacaacttgcaaaccctgtgccaaacccaccgcatt
gagcgtgcggcgctgtttgatcagttcccttatactgaacatatggaatctggtgtatgg
ttgatccgaaaatag
DBGET
integrated database retrieval system
