Avibacterium volantium: NCTC3438_00171
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Entry
NCTC3438_00171 CDS
T06626
Symbol
carB
Name
(GenBank) Carbamoyl-phosphate synthase large chain
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
avt
Avibacterium volantium
Pathway
avt00220
Arginine biosynthesis
avt00240
Pyrimidine metabolism
avt00250
Alanine, aspartate and glutamate metabolism
avt01100
Metabolic pathways
avt01110
Biosynthesis of secondary metabolites
avt01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
avt00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
NCTC3438_00171 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
NCTC3438_00171 (carB)
00220 Arginine biosynthesis
NCTC3438_00171 (carB)
Enzymes [BR:
avt01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
NCTC3438_00171 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_3
ATPgrasp_Ter
RimK
ATP-grasp_4
ATP-grasp_5
CoA_binding_2
Epimerase
Motif
Other DBs
NCBI-ProteinID:
VEB21930
UniProt:
A0A3S4HRN1
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All DBs
Position
1:complement(170128..173322)
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AA seq
1064 aa
AA seq
DB search
MPKRTDIKTILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVVLVNSNPATIMTDPDM
ADVTYIEPITWQTVEKIIEKERPDAILPTMGGQTALNCALDLSKNGVLKKYGVELIGASE
DAIDKAEDRGRFKEAMAKIGLNTPKSFVCHTFDEAWAAQAEVGFPTLIRPSFTMGGSGGG
IAYNRDEFVAICERGFDASPTHELLIEQSVLGWKEYEMEVVRDKADNCIIVCSIENFDPM
GVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFAINPANGEMIVIEM
NPRVSRSSALASKATGFPIAKVAAKLAVGYTLNELRNDITGGLIPASFEPSIDYVVTKVP
RFAFEKFPKADDRLTTQMKSVGEVMAMGRTFQESLQKALRGLETGICGFNLLSEAPEKIR
TELGNPGPNRILYVADAFGAGFSLEEVHHYSKIDPWFLVQIQDLVQEELALEQKTLEQLD
YAELRRLKRKGFSDKRIAQLVKSTESAVRNLRKSFNLHPVYKRVDTCAGEFKSDTAYLYS
TYEEECEANPSDRKKIMILGGGPNRIGQGIEFDYCCVHAALALRESGFETIMVNCNPETV
STDFDTSDRLYFEPLTLEDVLEIIHVEQPYGVIVHYGGQTPLKLANALAENGVNIIGTSA
DSIDAAEDRERFQQILQQLGLKQPNNRTARNAIEAVLLAEEVGYPLVVRPSYVLGGRAMQ
IVYNVDELNQYMREAVQVSEDSPILLDHFLNNAIEVDVDCICDGEQVMIGGIMQHIEQAG
IHSGDSACSLPPYSLSTEIQDEIRRQTAAMAKALNVVGLMNVQFAVQDGVIYVLEVNPRA
SRTVPFVSKATGRPLAKIAARVMAGMSLSEQQIQGEIQPHFYAVKEAVFPFIKFPGVDTI
LGPEMRSTGEVMGVGQTFAEAFIKAQLGAGERIAKTGKVFLSVDDKDKARLLPIAQRLQE
QGYGLCATIGTANFLRENGIFAQIVNKVREGRPHIVDAIKNGEIAMVINTVGSLPESVED
SHSIRRSALQQKVFIQTTLAAAEALVESVKNLDDYKVYALQNLH
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgtacagacataaagacaatattaattatcggtgctggcccgattgtgatt
gggcaggcgtgtgaatttgattattcgggcgcgcaggcgtgcaaagcgttgcgtgaagaa
ggttataaggtggtgctagtgaactctaaccctgccaccattatgaccgaccccgatatg
gcggacgttacctacatcgagccaattacttggcaaacggtggaaaaaatcattgagaaa
gaacgtcctgatgccattttgccaacaatgggcggacaaaccgcgctgaattgtgcctta
gatctttccaaaaatggcgtgctgaaaaaatacggtgtggaactgatcggggcaagtgaa
gatgccattgataaggcggaagatcgtggtcgtttcaaagaggcaatggcgaaaattggc
ttgaatacgccaaaatcctttgtctgccatacctttgatgaagcttgggcggcacaggct
gaagtgggctttccaaccctaattcgtccctctttcacaatgggcggttctggcggtggg
atcgcctataaccgtgatgaatttgtcgccatttgcgaacgcggatttgatgcctctcca
acccacgaattactcatcgaacaatcggtgttaggctggaaagaatatgaaatggaagtg
gtgcgggacaaagcagacaactgcattatcgtctgctccattgagaattttgacccgatg
ggcgtgcatacaggcgattccatcaccgttgcgccagcgcaaacgctcaccgataaagaa
tatcaaattatgcgaaacgccagccttgcggtgttgcgtgaaattggcgtggatacgggc
ggttcaaacgtgcaatttgccattaatcctgccaacggcgaaatgatcgtgattgaaatg
aacccgcgtgtgagccgttcttctgcccttgcctcgaaagccacaggcttcccaatcgca
aaagtagcagcgaaattagccgtgggctatacgctcaatgaattgcgtaatgacatcacg
gggggattaatccctgcatctttcgagccgtccattgattatgtggtaaccaaagtacca
cgttttgcctttgaaaaattcccgaaagcagacgatcgcctcacgacgcaaatgaaatcg
gttggcgaagtgatggcaatgggacgcactttccaagagagtttgcaaaaagccttgcgt
ggtttggaaacgggcatttgtgggtttaatttgctttccgaagcccctgagaaaatccgc
accgagctaggtaacccaggcccgaaccgcattctttacgttgctgatgcctttggtgcg
ggctttagcttggaagaagtgcatcattattccaaaatcgacccgtggttcttagtgcaa
attcaagatttggtgcaagaagaattggcacttgagcaaaaaacgctggaacagctcgat
tatgcagagcttcgccgtttaaaacgcaaagggttctccgacaaacgtattgctcagttg
gtaaaaagcacggaaagtgcggtgcgaaatttacgcaaatctttcaatcttcaccctgtt
tataaacgcgtggatacttgtgcgggcgagtttaaatccgacaccgcatacctttattcc
acctatgaagaagaatgcgaagccaatccttctgatcgtaaaaaaattatgatcttaggc
ggtgggccgaaccgcatcgggcaaggtattgagtttgattattgctgtgtacacgccgcc
cttgccttgcgtgaaagcggctttgaaaccattatggtgaactgtaaccccgaaacggtt
tccaccgattttgacacctcagatcgcctttattttgagccgctcacccttgaagatgtg
ttagaaatcattcacgttgaacagccttatggcgtgatcgtgcattatggcggtcaaacc
ccattaaaacttgccaatgccctggcggaaaatggcgtcaatattatcggcacatcggcg
gatagcattgacgctgccgaagatcgcgaacgcttccaacaaattctacaacaacttggc
ttaaaacagcctaataaccgcacggcacgcaatgccattgaagcagtgctattagctgaa
gaagtgggctatccgctagtagtacgcccttcctatgtgctaggcggacgagcaatgcaa
atcgtgtataacgtggacgaactcaatcaatatatgcgtgaggcggtgcaagtttccgaa
gacagcccaattttgcttgatcacttcttaaacaacgccattgaagtggacgtagattgc
atttgcgatggcgaacaagtgatgatcggcggcattatgcagcatattgaacaagcgggt
attcacagcggtgatagcgcttgctcgttgccaccttattccttaagcactgaaattcaa
gatgaaatccgccgtcaaacggcggcaatggcaaaagccttgaacgtagtgggcttgatg
aatgtgcaatttgccgtgcaagatggcgtgatttatgtgttagaagtgaacccacgcgct
agccgtaccgtgccgtttgtgagtaaagctacagggcgaccattagccaaaatcgccgcg
cgtgtaatggcaggaatgagcctcagcgaacagcaaattcaaggcgaaattcaaccgcac
ttttatgcagtgaaagaagcggttttcccattcatcaaattcccaggcgtggacaccatt
ttagggcctgaaatgcgttccacaggggaagtgatgggcgtggggcaaacctttgcagaa
gcctttatcaaagctcaactaggggcaggtgaacgcattgccaaaacgggcaaagtattc
ctttccgttgatgacaaagacaaagcccgcttgctgcctatcgcccaacgcttgcaagaa
caaggctacggcttatgcgccaccataggcacagcgaacttcctgcgcgaaaacggtatc
ttcgcacaaatcgtcaataaagtgcgtgaaggccgcccacatattgtggacgcgatcaaa
aacggcgaaatcgctatggtgataaacactgtaggcagcctgcctgaaagtgtggaagac
agccactctattcgccgcagtgccttacaacaaaaagtcttcattcaaaccaccctcgcc
gccgctgaggccttagtggaaagtgtgaagaatttagatgattacaaggtttacgccttg
caaaacttacattaa
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