Avibacterium volantium: NCTC3438_00343
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Entry
NCTC3438_00343 CDS
T06626
Symbol
lysA
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
avt
Avibacterium volantium
Pathway
avt00300
Lysine biosynthesis
avt00470
D-Amino acid metabolism
avt01100
Metabolic pathways
avt01110
Biosynthesis of secondary metabolites
avt01120
Microbial metabolism in diverse environments
avt01230
Biosynthesis of amino acids
Module
avt_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
avt00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NCTC3438_00343 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NCTC3438_00343 (lysA)
Enzymes [BR:
avt01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
NCTC3438_00343 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
VEB22236
UniProt:
A0A447SNA6
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Position
1:complement(337706..338956)
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AA seq
416 aa
AA seq
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MDFFQYQDDQLMAEQVPVREIAAQFGTPAYVYSRATFERHWHAFDNALGDHPHLICFAVK
SNPNLAILNIMAKLGSGFDIVSQGELERVLAAGGDASKVVFSGVAKSEQEIERALNVGIR
CFNVESLAELYRINDVAGRLNKIAPISLRVNPDVDAHTHPYISTGLKENKFGVSVDEARE
VYRIASQLAHIKITGMDCHIGSQLTEIQPFLDATDRLIVLMQQLAQDGIELEHLDLGGGL
GVTYKDEEAPHPSEYAKALLAKLKDYPNLEIILEPGRAITANAGILLTKVEYLKSNESRN
FAIVDTGMNDMIRPALYQAYMKIIEVDRSLPRETKVYDVVGPICETSDFLGKQRELAIAQ
GDLIAQRSAGAYGASMASTYNSRPRAIEVMVDGDQTHLIKRRETYPELWQLEAMLP
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggatttttttcaatatcaagatgatcaactgatggcggaacaagtaccagtgcgtgaa
attgccgcgcagtttggcacgcctgcttatgtttattcccgtgcgacctttgaacgccac
tggcacgcttttgataacgccttaggcgatcatccgcatctcatttgcttcgcggtgaaa
tccaacccgaacttagccattttgaacattatggcgaagctaggatcgggctttgatatt
gtgtcgcaaggagaattagaacgcgtccttgcggcaggtggtgatgcgagcaaagtggtg
ttttctggcgtagcaaaatcggaacaagaaattgagcgtgcgttaaacgtgggcattcgt
tgtttcaacgtagaaagccttgcggagctttaccgcattaatgacgtggcagggcggtta
aataaaatcgcgccaatttctttacgcgtgaaccccgatgtggacgcacacacccaccct
tacatttccacaggcttgaaagaaaataaattcggcgtgagtgttgatgaagcccgcgaa
gtctatcgcatcgcaagccagctagcacacattaaaattaccggaatggattgccatatc
ggctcacaactcacggaaattcagccgttccttgatgccacagatcgtttgatcgtgcta
atgcagcagcttgcacaagatggcattgaattagaacatttagacttgggcggcggctta
ggtgtaacctacaaagacgaagaagcccctcacccaagtgaatatgcaaaagcgttatta
gctaaattaaaagattatccaaacttggaaattattcttgaaccagggcgtgcgatcacc
gccaatgcagggattttgctcaccaaagtagaatacctaaaaagcaatgaaagccgtaat
ttcgccattgtagatacgggaatgaacgatatgattcgccctgcgttgtatcaagcttat
atgaagattatcgaagtggatcgcagcctaccgcgtgaaacaaaagtttatgatgtggtc
ggcccgatttgcgaaacctctgatttcttaggcaaacagcgtgaactggcaattgcccaa
ggggatctcatcgcccagcgttctgctggtgcttatggtgccagtatggcttctacctat
aattcccgcccaagagccattgaagtgatggtggacggcgatcaaacacacctcatcaaa
cgccgcgaaacctaccctgaattatggcagctagaggcaatgttgccatag
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