Avibacterium volantium: NCTC3438_00387
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Entry
NCTC3438_00387 CDS
T06626
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein mutS
KO
K03555
DNA mismatch repair protein MutS
Organism
avt
Avibacterium volantium
Pathway
avt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
avt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
NCTC3438_00387 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
avt03400
]
NCTC3438_00387 (mutS)
DNA repair and recombination proteins [BR:
avt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
NCTC3438_00387 (mutS)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
Motif
Other DBs
NCBI-ProteinID:
VEB22323
UniProt:
A0A447SNW3
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Position
1:complement(381776..384367)
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AA seq
863 aa
AA seq
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MNLDDKNSQHTPMMQQYLRLKAENPEILLFYRMGDFYELFYDDAKKAAALLDISLTKRGQ
SAGQPIPMAGVPYHAVEGYLAKLVQLGESVAICEQVGDPATAKGPVERQIVRIVTPGTIS
DEALLPERQDNLIAAVYQEKDKFGLATLDMASGRFQLSEPASKESLQAELQRIQPVELLY
CEDFEDRYLIENAKGLRRRPIWEFELKTAIEQLNRQFGTQDLRAFGVEKSPLGLCAAGCL
LQYAKETQRTALPHIQSISLVQNNENIQLDAATRRNLELTQNLTGGTEHTLASVLDKCVT
PMGSRLLKRWIHQPIRDREKLTLRQQTISQILQQDLVAEFQPHLQQVGDMERILARVALR
SARPRDLTRLRTALAQIPAIQDYLNQQHCPQFAAFSQQIADFSAQLDLLERAIIENPPLL
IRDGGVIAEGFNAELDEWRSLSDGATRYLEDLEQRERQSTGIDTLKIGFNAVHGYYIQIP
QGQVHKAPIHYVRRQTLKNAERYIIPELKTYEDKVLKAKGAALTLEKQLYEEIFDELLPH
LGALQLASLALAELDVLTNLAERAETLNYVAPTFSDEIGVDIQNGRHPVVEQVSKNPFIA
NPVKLSADRHLLIITGPNMGGKSTYMRQTALITLMAYMGSFVPAERAMLGPIDRIFTRIG
ASDDLASGRSTFMVEMTEMANILHQASANSLVLIDEIGRGTSTYDGLSLAWACAEWLAQK
VRSLTLFATHYFELTVLPEQLKGIANVHLDAVEHNDTIAFMHAVQEGAASKSYGLAVAAL
AGVPQSVIKLAKQKLAQLEKFSQQNNQLNVDAMQQQGQGELLLMEENEQKDALWQMIENF
DPDEMSPKQALSYLYQLKKMQRG
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgaacttagacgataaaaatagccaacacaccccaatgatgcagcagtaccttcgattg
aaagcagaaaatcctgagattttgctgttttatcgaatgggggatttttatgaattattt
tatgatgatgcaaaaaaagcggcggcattgttggatatttccttgaccaaacgtgggcag
tcggcagggcagcctattcctatggcgggtgtgccctatcacgcggtggagggctattta
gcgaaattagttcagcttggcgaaagtgtggcgatttgcgagcaagtgggcgatcctgcc
acggcaaaagggccggtggaacgccaaattgtgcgcattgttacccccggaacaatcagt
gatgaagccttgttgcctgaacgtcaggataatttgattgctgcggtttatcaggaaaaa
gacaaatttggcttggcaactttggatatggcatcggggcgttttcagttgagtgagcct
gctagcaaagagagtttgcaagcggaattacagcgcattcagcctgtggaattactttat
tgtgaagattttgaagatcgttatttaattgaaaatgcaaagggattacgccgccgtccc
atttgggaatttgaattaaaaactgccattgagcagcttaatcgtcaatttggtacgcaa
gatttacgcgcctttggggtagaaaaatccccccttgggctttgcgctgcgggatgtttg
ttacaatatgccaaggaaactcagcgcaccgcgttgccccatattcaaagcatcagtttg
gtacaaaataatgagaatattcaattagatgccgccacaagacggaatttagaactcacc
caaaatttaacaggtggcacagagcatacccttgcttccgtgctagacaaatgtgttacc
ccaatggggagtcgtttgctgaaacgttggattcaccaaccgattcgcgatcgtgaaaaa
ttaaccttacgccaacaaaccatcagtcaaattttgcaacaggatttagtggcagaattt
caaccgcacttgcaacaagtgggggatatggaacggattttagcgcgcgtggcattgcgt
tcagcgcgtccacgggatctcacccgtttacgcaccgcgctcgcgcaaattcctgcgatt
caagattatcttaatcaacaacattgtccgcaatttgctgcattttctcaacaaattgcc
gatttttcagcgcaattagatctattagaacgcgcgattattgaaaatccgcctttattg
attcgtgatggcggcgtgattgcggaaggctttaacgccgagcttgatgaatggcgttcg
ctgtctgatggcgcaacccgttatttggaggatttggaacaacgggagcgacaaagcacc
ggcattgacaccctaaaaattggttttaatgcggtacacggctattatattcaaattccc
caagggcaagtacataaagcgcctattcactatgttcgtcgtcaaacgctcaaaaatgcg
gaacgttacattattcctgaattaaaaacctatgaagataaagtgctgaaagccaaaggc
gcggcgcttacgctggaaaagcaactttatgaagaaattttcgatgaattattaccgcac
ttaggtgcattacagctggcaagccttgctttggcagaattagatgtgctaaccaactta
gcggaacgggcagaaaccctgaactatgttgcgccaacctttagcgatgaaattggcgtg
gatattcaaaatggtcgccaccctgtggtggaacaagtgtccaaaaatccgtttattgcc
aacccagtcaaactgagtgcagatcgtcatttattgatcataactggcccgaatatgggg
ggaaaaagcacctatatgcgtcaaactgcattgatcacgctaatggcctatatgggatct
tttgtgccagcagaaagagctatgctcggcccgatcgatcgcattttcacgcgtattggc
gcatcagatgatctggcttcagggcgctcaacctttatggtcgaaatgacggaaatggcg
aatattttgcatcaagccagcgcaaacagcttagtgcttattgatgaaattgggcgcggc
acgtccacctatgacggactttcccttgcttgggcttgtgcagaatggcttgcgcaaaaa
gtacgatcgctgaccttatttgctacgcattattttgagctgaccgttttgcctgagcag
ttaaaaggcattgccaacgtgcatttagatgcggtggagcataacgacaccatcgccttt
atgcacgcggtgcaagaaggcgcggcaagtaaaagttacggtttggcggtggcggcattg
gcaggcgttccgcaatcggtgattaaactcgccaaacaaaaactggcgcagttagaaaaa
ttctcccaacaaaacaatcagttaaatgtagatgcaatgcaacagcaaggacaaggagag
ctgttgttaatggaagaaaatgagcagaaagatgcgctttggcagatgattgaaaacttt
gatcctgatgaaatgagcccgaaacaagcgctttcttatttatatcaattaaagaaaatg
caacgcggatag
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