Avibacterium volantium: NCTC3438_00416
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Entry
NCTC3438_00416 CDS
T06626
Symbol
rfaF
Name
(GenBank) ADP-heptose--LPS heptosyltransferase 2
KO
K02843
lipopolysaccharide heptosyltransferase II [EC:
2.4.99.24
]
Organism
avt
Avibacterium volantium
Pathway
avt00540
Lipopolysaccharide biosynthesis
avt01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
avt00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
NCTC3438_00416 (rfaF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
avt01005
]
NCTC3438_00416 (rfaF)
Enzymes [BR:
avt01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.24 lipopolysaccharide heptosyltransferase II
NCTC3438_00416 (rfaF)
Lipopolysaccharide biosynthesis proteins [BR:
avt01005
]
Core region
NCTC3438_00416 (rfaF)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
PS_pyruv_trans
Tad2-like
Motif
Other DBs
NCBI-ProteinID:
VEB22373
UniProt:
A0A3S4H455
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All DBs
Position
1:419309..420364
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AA seq
351 aa
AA seq
DB search
MNILVIGPSWVGDMMMSHSLYQCLKQQYPDCQIDVLAPNWCKPLLERMPEVRGALTMPIG
HGTFGLKQRYEIGKSLRHQYDMAIVLPNSLKSAFIPVFAKIARRRGWKGESRYFFLNDLR
TNKNDYPMMVQRYVALAYEKNAVPTAAQMTFPYPYLQVSSQQIEQTKNHFHAQLAQAENR
SAIGFCPGAEFGPAKRWPHYHYAALAQMLIEKGYSIRLFGSAKDEQVGDEIRASLPENLQ
PYCLNLAGQTSLNQAVDLIADCQGVVTNDSGLMHVAAAVQRPLVALYGPTSPQYTPPLSH
HAVIIRLQKGGLEKIRHGKDSAEGYHQSLIDITPAMVMEKLSEILPHFDLA
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcttagtaattggcccatcttgggttggcgatatgatgatgtcgcacagttta
tatcaatgcttaaaacagcaatatcctgattgccaaattgatgtgcttgcgccaaattgg
tgtaaacccttgttggaaagaatgccggaagttagaggggcgctcacaatgcccatcgga
cacggcacctttggcttgaaacagcgctatgaaattgggaaaagcctaagacatcaatat
gatatggcgattgtattgccaaactcgctcaaatctgcgtttattcctgtgtttgccaaa
attgcccgccgccgtggttggaaaggggaaagccgttatttctttttgaatgatttacgc
accaataaaaatgattacccaatgatggtgcagcgctatgtggcattggcttatgaaaaa
aacgctgtgccaacggcagcacaaatgacctttccttacccttatttacaggtgagtagc
caacaaatcgagcaaaccaaaaaccatttccacgcacaacttgcacaggcagaaaatcgc
tctgcgattggtttttgtccgggcgcggagtttggccctgccaagcgctggccgcattat
cattatgctgcgcttgctcaaatgctgattgaaaaaggttacagcattcgcctgtttggt
tcagcaaaagatgaacaagtgggtgatgaaattcgtgccagtctgccagaaaatttacag
ccgtactgcttaaatttagcggggcaaaccagccttaatcaagcggtagatttaatcgca
gattgccaaggcgtggttaccaacgatagcggattaatgcacgttgcggcggcggtgcag
cgtccgcttgtagcgctttatggcccaactagcccgcaatacacgccaccattatcccat
cacgcggtgattattcgcctacaaaaaggcggattagaaaaaattcgtcatggcaaagac
agcgccgaaggctatcatcaaagtcttatcgacatcacgcctgcgatggtaatggaaaaa
ttaagcgaaattttaccgcactttgatctggcataa
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