Avibacterium volantium: NCTC3438_00646
Help
Entry
NCTC3438_00646 CDS
T06626
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
avt
Avibacterium volantium
Pathway
avt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
avt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC3438_00646 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
avt03019
]
NCTC3438_00646 (groL)
03110 Chaperones and folding catalysts [BR:
avt03110
]
NCTC3438_00646 (groL)
03029 Mitochondrial biogenesis [BR:
avt03029
]
NCTC3438_00646 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
avt04147
]
NCTC3438_00646 (groL)
Enzymes [BR:
avt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
NCTC3438_00646 (groL)
Messenger RNA biogenesis [BR:
avt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
NCTC3438_00646 (groL)
Chaperones and folding catalysts [BR:
avt03110
]
Heat shock proteins
HSP60 / Chaperonin
NCTC3438_00646 (groL)
Mitochondrial biogenesis [BR:
avt03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
NCTC3438_00646 (groL)
Exosome [BR:
avt04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
NCTC3438_00646 (groL)
Exosomal proteins of other body fluids (saliva and urine)
NCTC3438_00646 (groL)
Exosomal proteins of breast cancer cells
NCTC3438_00646 (groL)
Exosomal proteins of colorectal cancer cells
NCTC3438_00646 (groL)
Exosomal proteins of bladder cancer cells
NCTC3438_00646 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Fe-ADH
Motif
Other DBs
NCBI-ProteinID:
VEB22782
UniProt:
A0A3S5DJ77
LinkDB
All DBs
Position
1:652453..654096
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKDVKFGNDARVKMLNGVNILADAVKVTLGPKGRNVILDKAFGAPTITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGI
DKAVSAVVAELKALSKPCESSKEIEQVGTISANSDNVVGKLIAEAMEKVGKEGVITVEDG
TGLEDELAVVEGMQFDRGYLSPYFINKPESATVEFDNPFILLVDKKISNIRELLPVLEAV
AKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIAILTAGTV
ISEEIGMELEKATLEDLGQAKRVVINKDNTTIIDGVGEEAQIKGRVAQIRQQIEESTSDY
DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGIVAGGGVALI
RAATKVAASLKGDNEEQNVGIKLALRAMEAPLRQIVTNAGEEASVVASAVKSGEGNFGYN
AGSEQYGDMLEMGILDPTKVTRSALQFAASIAGLMITTEAMVTEIPKEDKADLGAGMGGM
GGMGGMM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaaagacgttaaatttggcaatgatgctcgcgtaaaaatgcttaacggtgta
aacattcttgcagacgcagtgaaagtaacccttggcccgaaaggtcgtaatgtaatttta
gacaaagcctttggcgcaccaacgatcacgaaagacggtgtatccgttgcacgtgaaatc
gaattagaagataaattcgaaaatatgggcgcacaaatggtgaaagaagtggcctctaaa
gccaatgacgcggcaggggacggtacaacaacggcaaccgtattagcccaagctatcgta
aacgaaggcttaaaagccgtggctgcgggaatgaacccgatggatttaaaacgcggtatt
gataaagctgtgagcgctgttgtggcagaattaaaagccctttctaaaccgtgcgaaagc
tcaaaagaaattgaacaagtgggaacaatctcagcaaactcagataatgtagtcggtaaa
cttattgccgaagcaatggagaaagtgggcaaagaaggcgtgatcaccgtagaagacggc
acaggtttagaagatgaattggcagtggttgaaggtatgcaattcgatcgtggttacctt
tcaccttatttcatcaacaagccagaatctgcaaccgtagaatttgacaacccgttcatt
cttttagtggacaaaaaaatctctaacattcgtgaattattgcccgtgttagaagctgtt
gcgaaagcaggtaaaccattgttaattatcgctgaagatgtggaaggcgaagcccttgcg
acccttgtagtgaacacaatgcgtggtatcgtgaaagtggctgcggtaaaagcaccgggc
tttggtgatcgccgtaaagcaatgttacaagatattgcgattttaaccgctggtactgtg
atttctgaagaaatcggtatggagttagaaaaagcgactttagaagatttaggtcaagcg
aaacgtgttgtgatcaacaaagacaacacaaccattattgacggcgtgggcgaagaagca
caaatcaaaggccgtgtggcacaaattcgtcagcaaattgaagaaagcacttcagattac
gacaaagaaaaattacaagaacgcgtggctaaattagctggcggtgtggctgtaattaaa
gtgggtgcggcaactgaagttgaaatgaaagagaaaaaagatcgcgttgaagatgcttta
cacgcaactcgtgcagctgtggaagaaggtatcgtagccggtggtggtgttgccttaatc
cgtgcggcaaccaaagttgcagcaagcttaaaaggcgataacgaagagcaaaacgtgggc
atcaaacttgccttgcgtgcaatggaagcaccattacgccaaatcgttaccaacgctggg
gaagaagcctctgtggtggcaagtgcggtgaaatctggtgaaggaaacttcggttacaac
gcaggttctgagcaatatggcgatatgcttgaaatgggtatcttagatccaactaaagta
acccgttcagcccttcaattcgctgcttctatcgcaggattaatgattaccactgaagcg
atggtaaccgaaattccaaaagaagataaagcagacctaggcgctggtatgggcggtatg
ggtggaatgggcggtatgatgtaa
DBGET
integrated database retrieval system
