Avibacterium volantium: NCTC3438_00725
Help
Entry
NCTC3438_00725 CDS
T06626
Symbol
mutM
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
avt
Avibacterium volantium
Pathway
avt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
avt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCTC3438_00725 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
avt03400
]
NCTC3438_00725 (mutM)
Enzymes [BR:
avt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
NCTC3438_00725 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NCTC3438_00725 (mutM)
DNA repair and recombination proteins [BR:
avt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NCTC3438_00725 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_6
DZR
Zn_ribbon_IS1595
Zn_ribbon_TiaS
Zn_ribbon_8
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
VEB22930
UniProt:
A0A3S4J8M3
LinkDB
All DBs
Position
1:719285..720100
Genome browser
AA seq
271 aa
AA seq
DB search
MPELPEVETTKNGISPYLTGFTIEKIVVRNPKLRWEISPQLSEFKQVKVSHLSRRAKYLI
IHTEKGAIIGHLGMSGSLRVVPQDSPIDKHDHLDIVMNNGKVLRYNDPRRFGAWLWTDNL
ADFHLFAKLGPEPLSAEFTGEYLFKKSRKKQTALKTFLMDNAVVVGVGNIYANETLFLCG
LHPLKLAKNLTKAQCELLVQTIKQVLATAIAQGGTTLKDFLQPDGRPGYFAQELRVYGNK
DKPCPTCGTKIESLVIGQRNSFFCPKCQKKA
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattacctgaagttgaaaccactaaaaatgggatttccccttatttaacagga
tttaccattgaaaaaatcgtagtgcgtaatcctaaattacgctgggaaatcagcccgcaa
ttaagtgagtttaagcaggttaaagtgagtcatctttcccgccgtgccaaatatctgatc
attcatacggaaaaaggtgcgatcattgggcatttaggtatgtcgggatctttgcgtgtc
gtgccacaggatagccccattgataaacacgatcatttagatattgtgatgaataatggc
aaggtgctgcgttataacgatcctcgccgttttggtgcgtggctttggacggataatctg
gcagattttcatctttttgccaaacttggcccagaacccctttcagcagaatttactggg
gaatatttgttcaaaaaatctcgtaaaaaacagaccgcacttaaaacctttttaatggat
aatgctgtggtggtgggcgtgggcaatatttatgccaatgaaacgctcttcttatgcggt
ttacatccgctaaaattagccaaaaacttaactaaagctcaatgcgaattgctggtgcaa
accattaaacaagtgcttgccactgccattgcgcaaggtggtacaacgttgaaagacttc
ttgcaacctgacggccgccccggttattttgcccaagaattaagggtttacggcaataaa
gataaaccttgtccaacgtgtgggaccaaaattgaaagtttagtcatcgggcaacgtaat
agctttttctgcccaaaatgtcagaaaaaagcataa
DBGET
integrated database retrieval system
