Avibacterium volantium: NCTC3438_00837
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Entry
NCTC3438_00837 CDS
T06626
Symbol
hmrR_1
Name
(GenBank) Copper export regulator
KO
K19591
MerR family transcriptional regulator, copper efflux regulator
Organism
avt
Avibacterium volantium
Brite
KEGG Orthology (KO) [BR:
avt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
avt03000
]
NCTC3438_00837 (hmrR_1)
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
avt01504
]
NCTC3438_00837 (hmrR_1)
Transcription factors [BR:
avt03000
]
Prokaryotic type
Helix-turn-helix
MerR family
NCTC3438_00837 (hmrR_1)
Antimicrobial resistance genes [BR:
avt01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexPQ-OpmE [MD:
M00769
]
NCTC3438_00837 (hmrR_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MerR_1
MerR-DNA-bind
MerR
DUF1836
HTH_17
HTH_3
UBAP-1_UBA2
NB-LRR
Med9
Sigma70_r3
Motif
Other DBs
NCBI-ProteinID:
VEB23147
UniProt:
A0A447SQ18
LinkDB
All DBs
Position
1:complement(830509..830907)
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AA seq
132 aa
AA seq
DB search
MNISQAAEKTGLSAKQIRDYEKAGLLPEAQRTLSGYRFYSEQDLSQLRFISNARKVGFSL
QQIRELLRLNSDPNRTSREVKAITEQHITELKDKIASLQEMLDLLQRWHCSCQGNDSPDC
SILSGLTEKTKL
NT seq
399 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcagccaagcagccgagaaaacaggtttatccgccaagcaaattagggattat
gaaaaagcgggattattaccagaggcgcaacgcactttatcgggttatcgcttttattct
gagcaggatttaagccagctgcgctttattagtaacgcgcgtaaagtgggattttcattg
caacaaattcgcgaattgttaaggttaaatagtgatccgaatcgtaccagtcgcgaagta
aaagccattacagaacaacatattacggagctaaaagataagattgcgagcttacaagaa
atgttggatttgttgcagcgctggcattgttcttgccaagggaatgatagccctgattgt
tctattctttcagggctaacggaaaaaacgaaattatag
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