Avibacterium volantium: NCTC3438_00858
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Entry
NCTC3438_00858 CDS
T06626
Symbol
penA
Name
(GenBank) Penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
avt
Avibacterium volantium
Pathway
avt00550
Peptidoglycan biosynthesis
avt01100
Metabolic pathways
avt01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
avt00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NCTC3438_00858 (penA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NCTC3438_00858 (penA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
avt01011
]
NCTC3438_00858 (penA)
Enzymes [BR:
avt01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
NCTC3438_00858 (penA)
Peptidoglycan biosynthesis and degradation proteins [BR:
avt01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
NCTC3438_00858 (penA)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
VEB23187
UniProt:
A0A3S4HSU9
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All DBs
Position
1:complement(852964..854901)
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AA seq
645 aa
AA seq
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MDLKKLLSQPTMEPIRDKKAERNLFIRRALVSFLGVLGLSAILLTNLYHLQIVNYDTYQT
RSNGNRIKLLPLPPTRGLIYDRYGKLLAENLTFFGLYIVPEKVENLDRTFEQLKKMVGLN
EDDIANFKKERRRSSRYTSILLKPDLTEEQIARFAVNQHQFPSLSVKPYFKRHYLYGEPL
THILGYVAKINDKDVERLKKEDKYANYAGSHNIGKLGIERYYEEQLHGEVGFEEVEINNR
GKVIRKLREQPAVAGKSIHLTIDLELQRYITDLLAGHKGAVVVLDPKDSSILAMVSTPSY
DNNLFVDGISGKDYKRLLEDPERPLYSRVTQGAYPPASTVKPFIAVAGLQEALITPSTTV
FDPGYWMLPNSTKRFRDWKKSGHGYTDLNKAITESSDTYFYQLAYNMGIDKLSGWMKAFG
FGLPTGLDIREETSAIMPSREWKQKRYKKPWLQGDTISVGIGQGYWTATPLQVAKALAIL
INNGKVNTPHLMKGVEGSFFEPYQDPFLYPDIKANDSYWAQAKRGMYNVINASNGTGRKA
FAGTNYHVAGKSGTAQVFSLKENQTYNAKSLSKELHDHAWFIGYAPYEDPKIVVSIILEN
AGGGGSNAGPVVRKIMDYYLNQRLPQVNQMENKQNEAQPQQEETE
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggatttaaagaaattgctttctcagccaacaatggagccgatccgcgataaaaaagcg
gagcgcaatctatttattcgccgcgccttggtgtcttttttaggcgtgcttgggctgtct
gcaattttgctcaccaatttataccatctgcaaatcgtcaattatgacacttatcaaacc
cgttctaatggcaaccgtatcaaattattgccgttgccaccaacacgcggtttgatttac
gatcgctatggcaaattgcttgccgaaaatctcaccttttttggcttatatatcgtgcca
gaaaaagtagaaaatttagaccgcacttttgaacagctcaaaaaaatggtgggcttaaat
gaagacgatattgcgaattttaagaaagagcgccgccgttcttcgcgctatacgtccatt
ttactcaagcccgatctcaccgaagaacagatcgcacgttttgcggtaaatcagcatcaa
ttcccgagtttatccgttaaaccttattttaaacgtcattatttgtacggcgaaccgctc
acccatattttaggttatgtggcaaaaattaatgataaagatgtggaacgcctgaaaaaa
gaagacaaatacgccaattatgctggctcgcacaatatcggcaagctcggtattgaacgc
tattacgaagaacaattacacggtgaagtgggctttgaagaagtagaaattaacaaccgt
ggtaaggtgatccgtaaattgcgcgaacagcctgcagtagcgggtaaaagcattcatctc
accattgatttagaattgcaacgttatatcactgatctgttagcgggacataaaggcgcg
gtggtggtgctagatccaaaagatagcagcattttagcgatggtttcaaccccaagttat
gacaataaccttttcgtagatggcatttcaggtaaagattacaaacgcttgcttgaagat
cctgagcgtccgctttatagccgcgttacgcaaggggcttatccgccagcttctacggta
aaaccgtttattgcggtagctgggttgcaagaagccttgatcacgccaagcacaacggtg
tttgatccgggctattggatgttgccaaatagcaccaaacgtttccgtgactggaaaaaa
tcaggccacggttatacggatctcaataaagcgattaccgaatcttccgatacttacttt
tatcagctcgcttacaatatggggattgataaactttctggttggatgaaagcctttggt
tttggcctgccaacgggtttagatattcgggaagaaacctcggcaattatgccttcgcgc
gagtggaaacaaaaacgctataaaaaaccttggctgcaaggtgataccatttccgtgggt
attggacaaggctattggacagcaacgccattgcaagtggcaaaagccttagccatctta
attaataatggcaaggtaaatacaccgcacttaatgaaaggggtagaaggctctttcttt
gaaccttaccaagatccttttttatatcccgacattaaagccaatgatagttattgggcg
caagccaaacgtggtatgtataacgtgattaatgcgagcaacgggacagggcgtaaagcc
tttgctggcacgaactatcacgttgctggtaaatcaggcacagcgcaggttttcagctta
aaagaaaaccaaacctataacgctaaatcgctgagcaaagaattgcacgatcacgcgtgg
tttatcggctatgccccttatgaagacccgaaaatagtggtttctatcattttagaaaat
gcaggcggtggcggtagcaacgccggccccgtggtaagaaaaattatggattattatctt
aatcaacggcttccacaagtaaaccaaatggaaaataaacagaacgaagcacaaccccaa
caagaggaaacagaataa
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