Avibacterium volantium: NCTC3438_00961
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Entry
NCTC3438_00961 CDS
T06626
Symbol
rppH
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
avt
Avibacterium volantium
Pathway
avt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
avt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC3438_00961 (rppH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
avt03019
]
NCTC3438_00961 (rppH)
Messenger RNA biogenesis [BR:
avt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
NCTC3438_00961 (rppH)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
CHU_C
Motif
Other DBs
NCBI-ProteinID:
VEB23395
UniProt:
A0A447SQI4
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All DBs
Position
1:complement(962114..962731)
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AA seq
205 aa
AA seq
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MIDFDGYRPNVGIVICNRKGQVLWAKRYGQNSWQFPQGGINDNETAEQAMYRELFEEVGL
TRKDVKLLYVSKQWLRYKLPKRLLRYDSKPMCIGQKQRWFLLQLVSDEKDINMQTTKSPE
FDGWRWVSFWYPVRQVVPFKKEVYRKAMKEFAAVLFNGKNQPNSYSQEQKSSPNHSAPNT
ANKYSGKKYSSGKFHKRSFHRTRGA
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgatttcgatggctaccgtccgaatgtgggaattgtcatttgtaaccgtaaaggt
caggttttgtgggcgaaacgctatgggcaaaactcgtggcagtttccgcaaggcggcata
aacgataatgaaacggctgagcaggcgatgtatcgtgagctttttgaagaagtgggttta
acccgtaaagatgttaaattgctttatgtttcaaaacaatggttgcgctataaacttcct
aaacgcttattacgctacgacagcaaaccaatgtgtatcggacaaaaacagcgttggttc
ttattgcaattagtttcggacgaaaaagacattaatatgcaaaccaccaaatcgccagaa
tttgatggctggcgttgggtgagtttttggtatcctgtgcgtcaggttgtgcctttcaaa
aaagaagtgtaccgcaaggcaatgaaggaatttgcggcggtattatttaatgggaaaaat
cagccaaattcctattctcaagaacagaaatcttcgccaaaccattctgcaccaaatacg
gcgaacaagtattctggtaaaaaatattcatcaggcaaattccataaacgttcatttcat
cgaacaaggggggcataa
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