Avibacterium volantium: NCTC3438_00982
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Entry
NCTC3438_00982 CDS
T06626
Symbol
ddlB
Name
(GenBank) D-alanine--D-alanine ligase B
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
avt
Avibacterium volantium
Pathway
avt00470
D-Amino acid metabolism
avt00550
Peptidoglycan biosynthesis
avt01100
Metabolic pathways
avt01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
avt00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NCTC3438_00982 (ddlB)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NCTC3438_00982 (ddlB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
NCTC3438_00982 (ddlB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
avt01011
]
NCTC3438_00982 (ddlB)
Enzymes [BR:
avt01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
NCTC3438_00982 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:
avt01011
]
Precursor biosynthesis
Amino acid ligase
NCTC3438_00982 (ddlB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_4
CPSase_L_D2
ATP-grasp
ATPgrasp_ST
TTL
Motif
Other DBs
NCBI-ProteinID:
VEB23437
UniProt:
A0A3S4IC72
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All DBs
Position
1:988654..989580
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AA seq
308 aa
AA seq
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MKKTLKQEKIAVLLGGTSAEREVSLNSGEAVLNALKSLGYDAHPIDPKTFPVAELKQQGF
DRVFNILHGRGGEDGTMQGLLEQIGIPYTGCGVMASALTMDKMRTKMLWKAFGLPVANME
IVTKSTVSELNPAAVVEKLGLPLMVKPSLEGSSVGLRKVNQLDELQSAVEFALGFDDTIL
IEEWLAGDEFTLPVLDNEVLPAIKIVPEGEFYDYEAKYVSDNTQYFCPAGLTEEREQELR
QLVKRAYDAVGCRGWSRIDVMMDAEGQFRLVEVNTNPGMTSHSLFPKSAATVGYSFEQLV
EKILELSV
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaacattaaaacaagaaaaaattgccgtgttacttggtggaacttctgccgag
cgtgaggtttcgcttaattcaggcgaagccgtgcttaatgcgttaaaaagccttggctat
gacgcgcacccgattgatccgaaaacctttcctgtggcggaattaaaacaacagggcttt
gatcgtgtattcaatattttgcacggacgtggtggggaagacggcacaatgcaaggcttg
cttgagcaaattggtattccttacacaggctgtggggtaatggcatctgccttaacaatg
gataaaatgcggactaaaatgttgtggaaagcctttggcttaccagtggcgaatatggaa
atcgtaacaaaatcaacagtatccgaactaaaccctgccgcagttgtcgaaaaattaggt
ctgccgttgatggtaaaaccttcgttggaggggtcaagtgtggggctaagaaaagtcaat
caacttgatgaattacaaagtgcggtggaatttgccttaggttttgacgataccattttg
attgaagaatggcttgccggtgatgaatttaccctgccagttttagacaatgaagtgttg
ccagcgatcaaaatcgtgcctgaaggtgagttttatgattatgaagcgaaatatgtttcc
gataatacgcaatatttttgtccagcaggtttaactgaggaacgtgagcaagaattgcgt
caattagtgaagcgcgcttatgatgcggtaggttgtcgtggttggagtcgtattgatgtg
atgatggacgctgaagggcaattccgcttagtggaagtgaacactaacccaggaatgacc
agccatagtttattcccgaaatcagcggcaaccgtgggctattctttcgaacagcttgta
gagaaaattttggagcttagtgtttaa
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