Avibacterium volantium: NCTC3438_01330
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Entry
NCTC3438_01330 CDS
T06626
Symbol
fadD
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
avt
Avibacterium volantium
Pathway
avt00061
Fatty acid biosynthesis
avt00071
Fatty acid degradation
avt01100
Metabolic pathways
avt01212
Fatty acid metabolism
avt02024
Quorum sensing
avt04146
Peroxisome
Module
avt_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
avt00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
NCTC3438_01330 (fadD)
00071 Fatty acid degradation
NCTC3438_01330 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
NCTC3438_01330 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
NCTC3438_01330 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
avt01004
]
NCTC3438_01330 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
avt04147
]
NCTC3438_01330 (fadD)
Enzymes [BR:
avt01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
NCTC3438_01330 (fadD)
Lipid biosynthesis proteins [BR:
avt01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
NCTC3438_01330 (fadD)
Exosome [BR:
avt04147
]
Exosomal proteins
Exosomal proteins of breast milk
NCTC3438_01330 (fadD)
Exosomal proteins of breast cancer cells
NCTC3438_01330 (fadD)
BRITE hierarchy
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Ortholog
Paralog
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GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Fve
AMP-binding_C_2
DUF5065
Motif
Other DBs
NCBI-ProteinID:
VEB24082
UniProt:
A0A447SRE5
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All DBs
Position
1:1342591..1344279
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AA seq
562 aa
AA seq
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MEKPWFINYPEGAERELDTSAYENILDMFDKAVREHPDRAAYINMGQVLTFRKLEERSRA
FAAYLQNELKLQQGDPVALMMPNLLQYPIALFGILRAGMVVVNVNPLYTPRELEHQLQDS
GAKAIVVVSNFASTLEKVVFNTEVKHVILTRMGDQLSFGKRTLVNFVVKYIKKLVPKYKL
PHAVTFREVLSVGKYRQYVRPHLTGNDLAFLQYTGGTTGVAKGAMLSHHNIITNVFQAKW
IAYPFVGDHTRERKAILALPLYHVFALTVNCLLFIELGVTAILITNPRDIDGFVKEMKKY
RFVAITGVNTLFNALLNNENFKEIDFSQLKLSVGGGMAIQQSVATRWHETTGCNIIEGYG
MTECSPLIAACPINVVKHNGTIGVPVPNTDIKIIKDNGEEAQLGEPGELWVKGEQVMQGY
WKRPEATAEVLKDGWLATGDIVVMDESYSLRIVDRKKDMILVSGFNVYPNEIEDVIMLNY
KVAEVVAIGVPNEVSGETIKVFVVKKDESLTRDELRQHCRQHLTGYKVPKDIEFRDELPK
SNVGKILRRVLRDEELAKRPAN
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagccttggtttatcaattatccagaaggtgcagaaagggaactggatacttcc
gcctatgaaaatattttagatatgtttgataaggcggtgcgcgaacaccctgatcgggct
gcttatattaatatggggcaagtgctgacctttcgtaaattagaagagcgtagccgcgcc
tttgctgcttatttgcaaaatgaattgaagttacaacaaggcgatcctgtggcattgatg
atgccaaatttattgcaatatcctattgcgctatttggtattttacgcgctggaatggtg
gtggtaaatgttaatcccctttacacaccaagagagctagaacatcagctacaagacagc
ggtgcgaaagccattgtggtggtgtcaaatttcgcttcaacccttgaaaaagtggtgttc
aatacagaagtgaaacacgttattttaacccgaatgggcgatcagctttcttttggtaag
cgcacgctggtgaatttcgtggtgaaatacattaaaaagctcgtgccaaaatataaatta
ccgcacgccgtaacgttccgtgaagtgctgtctgtgggcaaatatcgtcaatatgttcgc
ccacatttaaccggcaatgatcttgctttcttacaatatacgggcggcacaacaggcgtt
gccaaaggcgcaatgctttctcatcacaatattattaccaatgtatttcaggcaaaatgg
attgcctatcctttcgtgggcgatcacacgcgcgaacgcaaagccattttggctttaccg
ctgtatcacgtttttgctttaaccgtaaattgcttattgtttattgagctgggcgttacc
gcaattttgatcaccaatccgcgtgatattgatggttttgtcaaagagatgaaaaaatat
cgctttgttgccattactggggtaaacaccttatttaacgccttgttgaataatgaaaat
ttcaaagaaatcgatttttcacaattaaaactttccgttggtgggggaatggccattcag
caatctgtggcaactcgttggcacgaaaccaccggttgtaacattattgaaggctatgga
atgacagaatgttcgccattgattgccgcttgtccaatcaatgtagtgaaacacaatggc
actattggtgttcccgtgccgaatacggatattaaaatcatcaaagataatggcgaagaa
gctcaacttggtgaaccaggggagctttgggtgaaaggcgagcaggtgatgcaagggtat
tggaagcgtccagaagccacagcagaagtgctgaaagacggctggcttgccacaggggat
attgtggtgatggacgaatcttatagcttacgcattgtagatcgcaaaaaagatatgatc
ttggtttcaggctttaatgtgtatccaaatgaaattgaagatgtgattatgctcaattac
aaagtggcagaagtggtggctattggcgtgccaaatgaagtgtcgggggaaaccattaaa
gtatttgtggtgaaaaaagatgaaagtttgacgcgtgatgagctacgccaacattgccgc
cagcatctcaccggctataaagtaccgaaagacattgaatttagagatgaattaccaaaa
tccaatgtaggtaaaattctgcgccgcgtactgcgcgatgaagaattagccaaacgacca
gcaaattaa
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