Avibacterium volantium: NCTC3438_01398
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Entry
NCTC3438_01398 CDS
T06626
Symbol
rarA
Name
(GenBank) Replication-associated recombination protein A
KO
K07478
putative ATPase
Organism
avt
Avibacterium volantium
Brite
KEGG Orthology (KO) [BR:
avt00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
NCTC3438_01398 (rarA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MgsA_C
AAA_assoc_2
AAA
RuvB_N
AAA_5
Mg_chelatase
AAA_16
AAA_14
AAA_22
AAA_19
ResIII
AAA_30
Sigma54_activat
nSTAND3
DNA_pol3_delta2
AAA_3
ABC_tran
Sigma54_activ_2
AAA_28
AAA_2
AAA_18
RNA_helicase
DUF815
Cdc6_lid
AAA_11
AAA_33
ATP-synt_ab
NPHP3_N
AAA_17
Parvo_NS1
AAA_25
TsaE
RsgA_GTPase
AAA_24
bpMoxR
NACHT
NTPase_1
DUF5906
T2SSE
TIP49
NB-ARC
IstB_IS21
AAA_7
RCF1-5-like_lid
Motif
Other DBs
NCBI-ProteinID:
VEB24205
UniProt:
A0A447SRI0
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All DBs
Position
1:1409080..1410429
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AA seq
449 aa
AA seq
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MSNLAFDFAENDFRPLAARMRPTHLDEYYGQSHLIGVGKPLRKAIEAGHIHSMILWGPPG
TGKTTLAEIIAQRINAEVERISAVTGGVKEIREAIERAKQNRLAGQRTILFVDEVHRFNK
SQQDAFLPYIEDGTVIFIGATTENPSFELNNALLSRARVYVLKSLTAQEIEQVLQRAIND
KEKGLGNLNLTLEDNLLAMLAEYVNGDARLALNSLELMADMAEEGKNGKFLHRTLLTEVL
GERQARFDKQGDRFYDLISALHKSVRGSAPDAALYWYARILTAGGDPLYVARRLLAIASE
DVGNADPRAMQVAIAAWDCFTRVGAAEGERAIAQAIIYLAVAPKSNAVYQAFKAAKKHAL
ESPDYDVPEHLRNAPTHLMKELGFGAEYRYAHNEENAYAAGENYFPEALKDPQYYFPVAR
GMEIQIREKLEKLRQLDEQSPTIRYKSGK
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatcttgcttttgattttgctgaaaatgatttccgccctttagcggcgagaatg
cgcccaacccatttagatgaatattacgggcagagccatttaattggcgtgggcaaacca
ttacgcaaagccattgaagcagggcatattcactcaatgattttgtgggggccgcccggc
acaggcaaaaccaccttggcagaaattattgcgcaacgcattaatgcagaagtggaacgg
atttctgcggtaacaggtggggtaaaggaaattcgagaagccattgaacgtgccaaacaa
aatcggcttgcggggcagcgtaccattttatttgtggacgaagtccatcgtttcaacaaa
agccagcaagatgcctttttgccttatattgaagatggcacggtgatttttattggcgca
accactgaaaatccttcttttgaactgaataacgccttgctttcgcgtgcgcgcgtgtat
gttctgaaatccttaaccgcacaagaaatcgaacaagtattacagcgcgctattaatgac
aaagaaaaagggctaggcaaccttaatttaaccttagaagacaatttgcttgcaatgctg
gcggaatatgtcaatggcgatgcacgccttgcattaaatagccttgaattaatggcagat
atggcggaagagggcaaaaatggcaaatttttgcaccgcactttattaacggaagtgttg
ggtgaacggcaagcccgttttgataaacaaggcgatcgcttctatgatctcatctcagcc
ttgcataaatccgtgcgtggttcagcgcctgatgccgctttgtattggtatgcacgtatt
ttaaccgcaggcggcgatcccctctatgtggcgcgccgtttattggccattgcctcagaa
gatgtaggcaatgccgatccgcgcgcaatgcaagtggccattgccgcttgggattgtttc
acacgcgtgggcgcagcagaaggggagcgtgccattgcgcaagccattatttacttagcc
gttgcgccgaaaagtaatgcggtgtatcaagctttcaaagccgcgaaaaagcacgcctta
gaaagccctgattatgatgtgccagagcatttacgcaacgcgccaactcatttgatgaaa
gaactaggtttcggcgcagaatatcgttatgcacataatgaagaaaatgcttatgctgca
ggggaaaattatttcccagaagcgctgaaagatccccaatattatttccctgttgctcga
ggaatggaaattcaaattcgcgaaaaattagaaaaacttcgccaactagacgagcaaagc
ccgactatccgttataaatctggtaagtag
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