Avibacterium volantium: NCTC3438_01539
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Entry
NCTC3438_01539 CDS
T06626
Symbol
gntR
Name
(GenBank) Gluconate utilization system GNT-I transcriptional repressor
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
avt
Avibacterium volantium
Brite
KEGG Orthology (KO) [BR:
avt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
avt03000
]
NCTC3438_01539 (gntR)
Transcription factors [BR:
avt03000
]
Prokaryotic type
Helix-turn-helix
LacI family
NCTC3438_01539 (gntR)
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GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_3
Peripla_BP_4
LacI
HTH_10
HTH_IclR
HTH_3
Hpr_kinase_N
HTH_60
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
VEB24475
UniProt:
A0A3S4GYA0
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Position
1:1564514..1565518
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AA seq
334 aa
AA seq
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MNRRKRPTLQMIADHLGLTKMTISRYLRNPDSVAPETQHKIAAAIEQFGYIPNRAPDILS
NAKSLAIGVLLPSLTNQVFAEVLKGIELITDKAGYQTMVAHYGYSVEKEEQRIESLLSYN
VDGLILSENHHSPRTLKMLEVANIPVIEIMDSSEMGIQQVVGFDNVAAAQSMVETMIHYG
HKNILYFTARMDKRTKLKMQGYENAMKKHGLTPHSLITSEPSSFTLGANLLRQALSQYPE
TNGIFCTNDDLAIGALFECQRLGIKIPQEIAIAGFHGHDVGQSMTPQLATVITPRLEIGK
IAAQELLNRLQGIPMKSHIINLGYEIHLGQSVKP
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgaatagacgaaaacgccccaccctacaaatgattgccgatcatcttggtttaaccaaa
atgaccattagccgttatttacgcaatcctgattccgttgcgccagaaacgcagcacaaa
atcgcagccgcaattgaacaatttggctatatccctaaccgagcgcctgatattttatct
aacgccaaaagtttggccattggcgtgttattgccctctctcactaaccaagttttcgcg
gaagtgttgaaaggtattgaattaattacggataaagctggctatcaaacgatggtggcg
cactatggatatagcgtagaaaaagaagaacaacgcattgaaagcctgctttcttataat
gtggacggtttaattttatcggaaaatcaccatagcccacgcaccttaaaaatgctcgaa
gtcgccaatattcctgtgattgaaattatggacagcagcgaaatgggcattcagcaagtg
gtgggctttgataatgtggcggcggcacaatctatggtggaaacaatgattcattacggg
cataaaaatatcctttatttcactgcgcgaatggacaagcgtaccaaactgaaaatgcaa
ggttatgaaaatgcaatgaaaaaacacggcttaacaccacatagcctgattacttctgaa
ccctcttctttcactttaggggcaaatttactacgccaagccttaagccaataccctgaa
accaacggcattttttgtaccaatgatgacttagctattggcgcgttgtttgaatgccag
cgattaggaatcaaaattccacaagagatcgccattgcaggtttccacggccacgatgtg
gggcaatcaatgacaccacaacttgccaccgtgatcacgccaagattagagattggcaaa
attgcagcgcaagaattactcaatcgcttacaaggtattccaatgaaaagccacattatc
aatttgggttatgaaattcatttggggcaaagtgttaaaccttaa
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